Table 1.
RNA sequencing analysis of selected genes downregulated (P ≤ 0.05) in SlbZIP1-RNAi transgenic line Ri2 compared with WT tomato plants
| Accession | Gene product | GO term | Log2 fold (Ri2/WT) |
|---|---|---|---|
| Solyc07g007450 | Iron-sulfur cluster assembly protein | iron ion binding | −7.821905209 |
| Solyc10g080580 | Receptor-like kinase | protein phosphorylation | −7.371740136 |
| Solyc02g067770 | Cysteine-rich receptor-like protein kinase 2 | protein phosphorylation | −7.212299904 |
| Solyc02g082990 | Stress-induced protein KIN2 | Stress response | −7.12544498 |
| Solyc11g064780 | F-box/LRR-repeat protein | Disease resistance | −7.033024239 |
| Solyc07g005040 | H+-ATPase | ATP binding | −6.828267133 |
| Solyc09g009250 | Trihelix transcription factor PTL | Regulation of transcription | −6.828267133 |
| Solyc02g086960 | Receptor-like kinase | protein phosphorylation | −4.80337823 |
| Solyc01g087050 | Zinc finger protein WIP2-like | Regulation of transcription | −4.746313437 |
| Solyc02g093540 | Cytochrome P450 | Controlling growth. Biotic stress | −4.369713338 |
| Solyc01g010080 | Potassium channel KAT3-like | potassium channel activity | −4.296148364 |
| Solyc12g009190 | Receptor-like protein kinase 3 | protein phosphorylation | −4.136708132 |
| Solyc11g065840 | MYB transcription factor | Regulation of transcription | −3.719575489 |
| Solyc05g047680 | Cytochrome P450 | Controlling growth. Biotic stress | −3.591453231 |
| Solyc10g074440 | Endochitinase | Stress response | −3.131124702 |
| Solyc11g011050 | MYB transcription factor | Regulation of transcription | −2.932906604 |
| Solyc02g085130 | Tubby-like F-box protein | Disease resistance | −2.871978777 |
| Solyc09g084460 | Wound-induced proteinase inhibitor 1 | Stress response | −2.844760217 |
| Solyc02g031950 | Pathogenesis-related protein | Response to biotic stimulus | −2.815681677 |
| Solyc05g025570 | Zinc finger protein | Regulation of transcription | −2.69118912 |
| Solyc08g069040 | Peroxidase 1 | Response to oxidative stress | −2.480134415 |
| Solyc01g097630 | F-box protein | Disease resistance | −2.411524305 |
| Solyc08g013760 | Putative F-box protein | Disease resistance | −2.33246778 |
| Solyc01g010910 | MYB transcription factor | Regulation of transcription | −2.319000953 |
| Solyc00g011160 | Cytochrome P450 like | Controlling growth. Biotic stress | −2.256203387 |
| Solyc01g111880 | MAP kinase kinase kinase 11 | Biotic and abiotic stress response | −2.14925363 |
| Solyc03g020030 | Proteinase inhibitor II | Stress response | −2.146031647 |
| Solyc01g066910 | Lipid-transfer protein DIR1 | Response to stress | −1.958613976 |
| Solyc04g007780 | Pathogenesis-related protein | Response to biotic stimulus | −1.762833313 |
| Solyc10g050210 | bZIP transcription factor | Regulation of transcription | −1.762190276 |
| Solyc03g020040 | Proteinase inhibitor II | Stress response | −1.707542181 |
| Solyc01g067360 | Zinc finger protein | Regulation of transcription | −1.701869583 |
| Solyc03g034390 | Lipid-transfer protein | Response to stress | −1.684560398 |