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. 2018 May 9;13(5):e0196178. doi: 10.1371/journal.pone.0196178

Table 4. Number of sequences, OTUs (97% sequence similarity), and richness, and diversity indexes estimated for the microbiome of each holobiont, holothurian feces, and seawater collected from the aquaculture tank.

Samples Total number of sequences
(reads)
Detected richness
OTUs (S)
Diversity
(Shannon–Wiener, H)
Species evenness
(Pielou’s index, J)
Alpha diversity
(α)
Estimated Richness
(S Chao ± se Chao)
Estimated Richness
(S ACE ± se ACE)
Anemonia sulcata
(SamplesM1+M2)
58839 5483 4.94 0.57 1478 10887 ± 272 11750 ± 71
Actinia equina
(Samples M7 + M8)
4065 254 2.99 0.54 60 630 ± 87 821 ± 20
Holothuria forskali
(Samples M5+M6)
375177 15898 4.35 0.45 3366 54867 ± 1240 54898 ± 52
Holothuria tubulosa
(Samples M3+M4)
392169 38713 6.60 0.62 10658 63609 ± 475 70507 ± 171
Holothurian feces
(Sample M9)
10838 462 2.37 0.39 98 2109 ± 330 1896 ± 27
Seawater
(Sample M10)
37215 2053 4.49 0.59 468 4596 ±219 4616 ± 43