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. 2018 Apr 27;14(4):e1006112. doi: 10.1371/journal.pcbi.1006112

Fig 4. Computational benchmarking of the opt-E protocol.

Fig 4

Recovery metrics on 60 antibodies for the opt-E protocol (optimization of total Rosetta energy) for each CDR that underwent GraftDesign in the RAbD design protocol. (A) %Recovered and %Sampled for each CDR length and cluster for the opt-E simulations. (B) Design risk ratios (DRR) for recovery of CDR length and cluster for the opt-E simulations. 95% confidence intervals for the Risk Ratio statistics are calculated as described in Methods.