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. Author manuscript; available in PMC: 2019 May 1.
Published in final edited form as: J Am Soc Mass Spectrom. 2018 Mar 19;29(5):935–947. doi: 10.1007/s13361-018-1915-0

Table 3. Inferred Phosphosite Occupancy on Intact Peptides Derived from Prohormones.

Summary of inferred phosphosite occupancy intensity ratios Log2(+AP/−AP) calculated for the intact forms of known endogenous peptides overlapping at least one verified phosphosite (bold, highlighted). Inferred phosphosite occupancy is calculated from non-phosphorylated peptides. Additional modifications are indicated: oxidized methionine (m), pyroglutamate (q), carbamidomethylation (c), C-term amidation (a), and N-term acetylation (Ac−).

Name Sequence Gene Log2(+AP/−AP) p-val
Enkelytin graphic file with name nihms952589t1.jpg PENK 10.36* 0.018
C-flanking pep. of NPY graphic file with name nihms952589t2.jpg NPY 9.26* 0.015
Enkelytin graphic file with name nihms952589t3.jpg PENK 8.22* 0.048
Enkelytin graphic file with name nihms952589t4.jpg PENK 8.18* 0.001
Enkelytin graphic file with name nihms952589t5.jpg PENK 8.05 0.140
PENK(233–254) graphic file with name nihms952589t6.jpg PENK 7.81* 0.042
PENK(233–254) graphic file with name nihms952589t7.jpg PENK 7.73* 0.037
C-flanking pep. of NPY graphic file with name nihms952589t8.jpg NPY 7.35* 0.010
O62827(153–188) graphic file with name nihms952589t9.jpg ADM 6.75* 0.008
Manserin graphic file with name nihms952589t10.jpg SCG2 6.67* 0.010
C-terminal peptide graphic file with name nihms952589t11.jpg SCG5 5.99* 0.022
Neuropeptide Y graphic file with name nihms952589t12.jpg NPY 5.17* 0.004
GE-25 graphic file with name nihms952589t13.jpg CHGA 4.61 0.130
VIF graphic file with name nihms952589t14.jpg CHGA 2.79* 0.035
P011211(192–203) graphic file with name nihms952589t15.jpg PENK 1.18 0.034
PENK(140–179) graphic file with name nihms952589t16.jpg PENK 1.04 0.019
Adrenomedullin-11–26 graphic file with name nihms952589t17.jpg ADM 0.17 0.392
Secretolytin (NTE) graphic file with name nihms952589t18.jpg CHGB 0.07 0.873
SCG5 Peptide 1 graphic file with name nihms952589t19.jpg SCG5 −0.07 0.798
Little LEN graphic file with name nihms952589t20.jpg PCSK1N −0.10 0.044
Secretolytin graphic file with name nihms952589t21.jpg CHGB −0.15 0.047
P01211(192–203) graphic file with name nihms952589t22.jpg PENK −0.17 0.006
Secretolytin graphic file with name nihms952589t23.jpg CHGB −0.30 0.031
O62827(45–92) graphic file with name nihms952589t24.jpg ADM −0.34 0.010
*

Log2(+AP/−AP) > 2.0, p-value < 0.05