Table 2.

Organization of repetitive sequences in A. ipaensis genome.

Repetitive elements	Repeat number	Length (bp)	In total repeat (%)	In genome (%)
Total retrotransposons	2,444,183	9,88,193,900	87.77	66.68
LINE retrotransposons	163,947	43,942,874	3.9	2.97
SINE retrotransposons	2,859	726,676	0.06	0.05
LTR retrotransposons	2,277,377	950,690,158	84.44	64.15
Gypsy	1,727,232	796,763,491	70.77	53.76
Copia	343,066	91,500,532	8.13	6.17
LTR	23,529	1,543,961	0.14	0.10
Other	183,550	98,476,493	8.75	6.64
Other retrotransposons	668	47,680	0	0.00
Total DNA transposons	364,250	98,441,246	8.74	6.64
Total unclassified elements	311,209	84,709,729	7.52	5.72
Total transposable elements	3,120,310	1,125,924,736	–	75.97
Redundant		1,171,344,875
Nonredundant		1,125,924,736