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Distance-based methods of population structure analysis
| Reference | Clustering | Tool/package |
|---|---|---|
| Gao at el.(2007) [44] | Ward’s minimum variance algorithm | AWclust [84]: R package |
| Bouaziz at el. (2012) [43] | Spectral clustering (GMM) | SHIPS [85]: R package |
| Neuditschko at el.(2012) [63] | Super paramagnetic clustering (SPC) | NETVIEW [86]: MATLAB |
| Limpiti at el. (2014) [64] | Neighbor-joining (NJ) tree-based clustering | iNJclust [87]: C++ |
