. 2018 Mar 7;8(1):1–11. doi: 10.1556/1886.2018.00002

Supplementary material 2.

Isolated Enterobacteriaceae with resistance against 3^rd generation methoxyimino cephalosporins or carbapenems, and nonfermentative Gram-negative rod-shaped bacteria, from the environment of Libyan patients at the Bundeswehr Hospital of Hamburg.

Isolates from the environment of Libyan patients at the Bundeswehr Hospital of Hamburg
Enterobacteriaceae with resistance against 3^rd generation methoxyimino cephalosporins or carbapenems
Ward	Room number	Sample I.D.	Species	Isolation site	Day of isolation	In rep-PCR 95% identical with	In NGS-based MLST^a/ANI^b identical with	NGS-based MLST type
HBG-2	Room 4	20	K. pneumoniae	hands	Day 11	18 (HBG-L4), 26 (room 4 HBG-2)	8 (HBG-L2)^a,b, 18 (HBG-L4)^a,b, 26 (room 4 HBG-2)^(a),(b)	18 (HBG-L4), 26 (room 4 HBG-2)^(a),(b)
HBG-2	Room 3	21	K. pneumoniae	hands	Day 11		None
HBG-2	Room 4	26	K. pneumoniae	handle of a bag	Day 11	18 (HBG-L4), 20 (room 4 HBG-2)	8 (HBG-L2)^(a),b, 18 (HBG-L4)^(a),b, 20 (room 4 HBG-2)^(a),b	18 (HBG-L4), 20 (room 4 HBG-2)
HBG-2	Room 1	27	K. pneumoniae	hands and beard	Day 11	16 (HBG-L3), 28 (room 3 HBG-2)	16 (HBG-L3)^a,b, 28 (room 3 HBG-2)^a,b	16 (HBG-L3), 28 (room 3 HBG-2)
HBG-2	Room 3	28	K. pneumoniae	walking frame	Day 11	16 (HBG-L3), 27 (room 1 HBG-2),	16 (HBG-L3)^a,b, 27 (room 1 HBG-2)^a,b	16 (HBG-L3), 27 (room 1 HBG-2),

Nonfermentative rod-shaped bacteria
Ward	Room number	Sample I.D.	Species	Isolation site	Day of isolation	In rep-PCR 95% identical with	In NGS-based MLST^a/ANI^b identical with	NGS-based MLST type
HBG-2	Room 3	19	P. aeruginosa	walker	Day 11		29 (room 3 HBG-2)^b
HBG-2	Room 3	29	P. aeruginosa	hands	Day 11		19 (room 3 HBG-2)^b
HBG-1-ITS	Room 1	30	P. putida	sink (spout)	Day 11		None

^a Completely identical based on MLST

^(a) identical based on MLST but not all markers found/complete due to lack of coverage.

^b Identical based on ANI (>= 99.9%)

^(b) highly similar based ANI (>= 99.5%, < 99.9%).