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. Author manuscript; available in PMC: 2019 May 7.
Published in final edited form as: Dev Cell. 2018 May 7;45(3):392–405.e6. doi: 10.1016/j.devcel.2018.04.001

Key Resources Table.

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
α-HA.11 Clone:16B12 BioLegend Cat# 901514; RRID:AB_2565336
α-Pgk1 (Phosphoglycerate Kinase monocolonal) Novex (Life Technologies) Part# 459250; RRID:AB_2532235
α-v5 monoclonal Invitrogen Cat# 46-0705; RRID:AB_2556564
α-mouse HRP-conjugated secondary GE Healthcare Cat# NA931-1ML
α-V5-coupled agarose Sigma Aldrich Cat# A7345-1ml
Rat α-tubulin alpha Bio-Rad Cat# MCA77G
Chemicals, Peptides, and Recombinant Proteins
Acid-washed glass beads, 425–600μm Sigma Aldrich G8772-500G
Imperial Blue Protein Stain Thermo Fisher Cat# 24615
Halt Protease Inhibitor Thermo Fisher Cat# 1861279
0.5mm dia Zirconia/silica beads BioSpec Products Cat# 11079105z
Hybond H+ membrane GE Healthcare Prod# RPN203B
Illustra Probequant Columns GC Healthcare Prod#28903408
ProlongGold w/DAPI LifeTechnologies Cat#P36935
Critical Commercial Assays
Amersham MegaPrime DNA Labeling Kit GE Healthcare Prod#RPN1604
Experimental Models: Organisms/Strains
S. cerevisiae: Strain background: SK1 (ho::LYS2, lys2, ura3, leu2::hisG, his3::hisG, trp1::hisG) ATCC (Kane and Roth, 1974) ATCC: 204722
A15055: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
Berchowitz/Amon labs N/A
A33024: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-3V5::HIS3MX6/RIM4-3V5::HIS3MX6
IME2st/IME2st
Berchowitz/Amon labs N/A
A37489: MATa/α
RIM4-EGFP::HIS3/RIM4-EGFP::HIS3
HTB1-mCherry-HISMX6/+
Berchowitz/Amon labs N/A
A38060: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-99A-3V5::HIS3MX6/RIM4-99A-3V5::HIS3MX6
This paper N/A
A38072: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-10A-3V5::HIS3MX6/RIM4-10A-3V5::HIS3MX6
This paper N/A
A38075: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-47A-3V5::HIS3MX6/RIM4-47A-3V5::HIS3MX6
This paper N/A
A38932: MATa/α
rim4-47A-EGFP::HIS3/rim4-47A-EGFP::HIS3
HTB1-mCherry-HISMX6/HTB1-mCherry-HISMX6
This paper N/A
B5: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-47A-3V5::HIS3MX6/RIM4-47A-3V5::HIS3MX6
IME2st/IME2st
This paper N/A
B48: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-3V5::HIS3MX6/RIM4-3V5::HIS3MX6
Berchowitz/Amon labs N/A
B67: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-52A-3V5::HIS3MX6/RIM4-52A-3V5::HIS3MX6
This paper N/A
B70: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-36A-3V5::HIS3MX6/RIM4-36A-3V5::HIS3MX6
This paper N/A
B73: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-16A-3V5::HIS3MX6/RIM4-16A-3V5::HIS3MX6
This paper N/A
B119: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-3V5::HIS3MX6/+
This paper N/A
B120: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-47A-3V5::HIS3MX6/+
This paper N/A
B123: MATa/α
ura3::pTUB1-GFP-TUB1::URA3/ura3::pTUB1-GFP-TUB1::URA3
SPC42-mCherry::NATMX6/SPC42-mCherry::NATMX6
ZIP1-GFP(700)/ZIP1-GFP(700)
RIM4-3V5::HIS3MX6/RIM4-3V5::HIS3MX6
This paper N/A
B126: MATa/α
ura3::pTUB1-GFP-TUB1::URA3/ura3::pTUB1-GFP-TUB1::URA3
SPC42-mCherry::NATMX6/SPC42-mCherry::NATMX6
ZIP1-GFP(700)/ZIP1-GFP(700)
RIM4-47A-3V5::HIS3MX6/RIM4-47A-3V5::HIS3MX6
This paper N/A
B129: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-21A-3V5::HIS3MX6/RIM4-21A-3V5::HIS3MX6
This paper N/A
B149: MATa/α
ura3::pTUB1-GFP-TUB1::URA3/ura3::pTUB1-GFP-TUB1::URA3
SPC42-mCherry::NATMX6/SPC42-mCherry::NATMX6
ZIP1-GFP(700)/ZIP1-GFP(700)
RIM4-47A-3V5::HIS3MX6/RIM4-3V5::HIS3MX6
This paper N/A
B152: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-27A-3V5::HIS3MX6/RIM4-27A-3V5::HIS3MX6
This paper N/A
B155: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-25A-3V5::HIS3MX6/RIM4-25A-3V5::HIS3MX6
This paper N/A
B197: MATa/α
ura3::pTUB1-GFP-TUB1::URA3/ura3::pTUB1-GFP-TUB1::URA3
SPC42-mCherry::NATMX6/SPC42-mCherry::NATMX6
RIM4-3V5::HIS3MX6/RIM4-3V5::HIS3MX6
This paper N/A
B198: MATa/α
ura3::pTUB1-GFP-TUB1::URA3/ura3::pTUB1-GFP-TUB1::URA3
SPC42-mCherry::NATMX6/SPC42-mCherry::NATMX6
RIM4-47A-3V5::HIS3MX6/RIM4-47A-3V5::HIS3MX6
This paper N/A
B207: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-3V5::HIS3MX6/RIM4-3V5::HIS3MX6
RPN6::rpn6-1::HIS3MX6/RPN6::rpn6-1::HIS3MX6
This paper N/A
B251: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3/ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1/pGAL-NDT80::TRP1
CLB3-3HA::KANMX6/CLB3-3HA::KANMX
RIM4-3V5::HIS3MX6/RIM4-3V5::HIS3MX6
RPN6::rpn6-1::HIS3MX6/RPN6::rpn6-1::HIS3MX6
IME2st/IME2st
This paper N/A
B343: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3 ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1, pGAL-NDT80::TRP1
CLB3-3HA:KANR CLB3-3HA:KANR
rim4Δ::HIS3MX6 rim4Δ::HIS3MX6
This paper N/A
B346: MATa/α
ura3::pGPD1-GAL4(848).ER::URA3 ura3::pGPD1-GAL4(848).ER::URA3
pGAL-NDT80::TRP1, pGAL-NDT80::TRP1
CLB3-3HA:KANR CLB3-3HA:KANR
rim4-45E-3V5::HIS3MX6 rim4-45E-3V5::HIS3MX6
This paper N/A
Oligonucleotides
Primer: CLB3 Northern blot probe forward: AGC ATA AGT AAG CCA AAA GTC GC (Carlile and Amon, 2008) N/A
Primer: CLB3 Northern blot probe reverse: C TAA TGC TAT CCA CTT CGC TAC G (Carlile and Amon, 2008) N/A
Recombinant DNA
RIM4-allA-HIS3 plasmid (pLB90) This paper N/A
RIM4-allE-HIS3 plasmid (pLB119) This paper N/A
Software and Algorithms
GraphPad Prism GraphPad software https://www.graphpad.com/scientific-software/prism/
Proteome Discoverer Thermo Fisher OPTON-30795
Mascot version 2.4.1 Matrix Science http://www.matrixscience.com/
Other
CellAsic ONIX microfluidic system Millipore Sigma Model EV-261
CellAsic ONIX microfluidic diploid yeast plates Millipore Sigma Cat #: Y04D-02-5PK
DeltaVision Elite Microcope GE Healthcare Prod #: 29065728