Table 3.
Top-5 HUB TFs identified in nitrate responsive modules of B. juncea cv.
| TF Family | TSIDs | ATID | K_PB_Darkred | GS_PB_Darkred |
|---|---|---|---|---|
| Darkred Module (Pusa Bold) | ||||
| mTERF | C353635 | AT1G03940.1 | 1 | 0.502264892 |
| mTERF | scaffold27810 | AT3G29590.1 | 0.973730396 | 0.441392809 |
| WRKY | scaffold25083 | AT4G30935.1 | 0.967432093 | 0.423912887 |
| mTERF | scaffold34741 | AT1G03940.1 | 0.954885337 | 0.407510167 |
| G2-like | scaffold12610 | AT1G80050.1 | 0.939802622 | 0.473269354 |
| TF Family | TSIDs | ATID | K_PB_Green | GS_PB_Green |
| Green Module (Pusa Bold) | ||||
| FHA | scaffold560 | AT2G21300.2 | 0.990369339 | 0.418543425 |
| RWP-RK | scaffold40979 | AT1G76350.1 | 0.964369287 | 0.682719805 |
| MYB-related | scaffold15430 | AT1G01520.1 | 0.955176601 | 0.440784753 |
| G2-like | scaffold13066 | AT3G24120.1 | 0.948521958 | 0.513756988 |
| bZIP | scaffold25792 | AT1G75390.1 | 0.937654789 | 0.474198621 |
| TF Family | TSIDs | ATID | K_PB_Royalblue | GS_PB_Royalblue |
| Royalblue Module (Pusa Bold) | ||||
| Orphans | scaffold44827 | AT1G78050.1 | 1 | 0.498046634 |
| C2H2 | scaffold17894 | AT1G72416.3 | 0.984662784 | 0.515236808 |
| bZIP | C352249 | AT1G61800.1 | 0.976846858 | 0.409009483 |
| SET | C347463 | AT1G08650.1 | 0.953023357 | 0.454410328 |
| WRKY | C344833 | AT2G30040.1 | 0.93985445 | 0.493192349 |
| TF Family | TSIDs | ATID | K_PB_Yellow | GS_PB_Yellow |
| Yellow Module (Pusa Bold) | ||||
| bZIP | scaffold33254 | AT2G23350.1 | 0.991272394 | 0.401528471 |
| C2H2 | C353855 | AT4G25340.1 | 0.987034074 | 0.478533088 |
| bZIP | scaffold500 | AT1G49760.2 | 0.986043424 | 0.514279776 |
| bZIP | scaffold501 | AT1G49760.2 | 0.982596836 | 0.528334689 |
| C3H | C350299 | AT3G53460.3 | 0.981115832 | 0.429174095 |
| TF Family | TSIDs | ATID | K_PJK_Blue | GS_PJK_Blue |
| Blue Module (Pusa Jaikisan) | ||||
| FAR1 | scaffold43285 | AT2G14170 | 0.99388054 | 0.449199376 |
| C3H | scaffold10084 | AT5G66760 | 0.99406313 | 0.443595033 |
| NAC | scaffold45345 | AT3G44110 | 0.990036914 | 0.455946169 |
| SNF2 | scaffold4567 | AT5G60670 | 0.988754 | 0.415705034 |
| FHA | C350767 | AT1G53750 | 0.986395 | 0.472080454 |
Pusa Bold and Pusa Jaikisan. Each module with top-5 TFs, their transcript sequence ID (TSID), ATID (Arabidopsis TAIR ID names), K (Scaled connectivity), GS (Gene significance) are shown in table.