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. 2018 May 10;9:1846. doi: 10.1038/s41467-018-04232-6

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© The Author(s) 2018

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — Transcriptome analysis of strains 1–9 and PAK-AR2. a X-axis represents the logarithm-transformed value of gene expression levels. Y-axis represents log2-transformed value of expression change folds. Genes belonging to different pathways are represented by various colored shapes as indicated. Others represent genes not belonging to the indicated pathways. b Expression profiles of the genes belonging to the cellular processes in KEGG_B_class. c Expression profiles of the genes belonging to the indicated metabolic pathways. Red color shows the genes with significantly reduced transcription levels. Blue color shows the genes with significantly elevated transcription levels