Table 2.
Unassembled BLASTX processed non-rRNA reads for each of the 12 metatranscriptome libraries were assigned to taxonomic and functional databases using MEGAN.
| Soil | Sample | BLASTX processed non-rRNA reads | Reads with no hits | Unassigned reads | Taxonomy assigned reads | KEGG assigned reads | COG assigned reads | SEED assigned reads |
|---|---|---|---|---|---|---|---|---|
| Suppressive | AV145 | 8,600,600 | 6,688,963 | 308,526 | 1,603,111 | 531, 384 | 126,596 | 117,696 |
| AV148 | 11,616,025 | 8,154,234 | 478,705 | 2,983,086 | 1,180,839 | 350,139 | 226,796 | |
| AV149 | 12,403,113 | 8,270,323 | 539,077 | 3,593,713 | 1,416,226 | 407,949 | 286,704 | |
| AV150 | 12,076,710 | 8,260,283 | 503,195 | 3,313,232 | 1,221,381 | 375,679 | 302,961 | |
| AV151 | 10,554,942 | 7,214,807 | 453,908 | 2,886,227 | 1,124,750 | 361,126 | 249,757 | |
| AV152 | 12,299,746 | 9,423,725 | 465,406 | 2,410,615 | 784,536 | 179,595 | 174,889 | |
| Non-suppressive | AV153 | 13,731,510 | 8,789,817 | 653,822 | 4,287,871 | 1,613,293 | 628,337 | 290,770 |
| AV154 | 11,725,325 | 7,610,545 | 529,943 | 3,584,837 | 1,334,134 | 448,388 | 236,235 | |
| AV155 | 11,471,857 | 6,974,415 | 561,896 | 3,935,546 | 1,506,368 | 488,523 | 299,664 | |
| AV156 | 12,466,243 | 5,779,271 | 657,011 | 6,029,961 | 2,125,805 | 593,659 | 583,782 | |
| AV158 | 10,696,481 | 6,300,453 | 534,665 | 3,861,363 | 1,483,534 | 575,621 | 329,783 | |
| AV160 | 13,448,688 | 7,755,148 | 699,578 | 4,993,962 | 2,031,003 | 733,993 | 367,619 |