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. 2018 May 10;19:58. doi: 10.1186/s13059-018-1431-3

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 3 — Analysis of the 68 k PBMC dataset [17]. a A visualization of reference labels for the full data set (left), along with the three cell subtypes selected for detailed analysis (right). b Comparison of the performance of different clustering methods, quantified by a Matthews correlation coefficient (MCC) [18] for each of the three cell subtypes