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. 2018 May 10;19:358. doi: 10.1186/s12864-018-4739-1

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Phylogenetic relationship and analysis of gene families. a. Phylogenetic analysis of C. pseudoreteaudii and 13 other ascomycota fungi. Predicted pattern of gain and loss of gene families in 14 organisms used in this study. The numbers on the branches of the phylogenetic tree correspond to acquired (left, red), conserved (middle, black), lost (right, green), by comparison with the putative pan-proteome. b. The numbers represent counts of gene families which are either specific to each species or common shared among multiple species. Cp, C. pseudoreteaudii; Nd, Neonectria ditissima; Fs, Fusarium solani; Fg, F. graminearum; Fo, F. oxysporum; Fv, F. verticillioides