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. 2018 May 4;9:892. doi: 10.3389/fmicb.2018.00892

Table 2.

Gene expression stability ranked by geNorm, NormFinder, and BestKeeper in all samples and 8, 12, and 16% ethanol shock treatment.

Group Overall rank Gene geNorm M-value Normfinder Stability value Bestkeeper SD (± Ct) CV(% Ct)
Total 1 dnaG 2 0.448 1 0.129 1 0.518 2.35
2 dopIII 1 0.431 6 0.260 2 0.623 2.703
3 gyrA 3 0.482 2 0.141 4 0.719 3.36
4 gyrB 4 0.673 3 0.157 5 0.900 3.73
5 proC 5 0.773 5 0.241 6 0.906 3.76
6 rrs 7 0.879 4 0.166 7 0.543 6.34
7 ddlA 9 0.999 9 0.547 3 0.699 3.14
8 ldhD 6 0.83 8 0.510 9 1.196 6.13
9 rpoA 8 0.917 7 0.365 8 1.151 5.87
8% ethanol ST 1 dpoIII 1 0.204 1 0.270 2 0.800 3.38
2 dnaG 2 0.225 2 0.272 3 0.800 3.54
3 gyrA 3 0.251 4 0.352 5 0.980 4.54
4 ddlA 9 1.022 9 1.036 1 0.710 3.14
5 rrs 7 0.802 3 0.349 4 0.310 3.78
6 gyrB 6 0.735 5 0.497 6 1.140 4.56
7 rpoA 4 0.863 6 0.527 8 1.180 5.92
8 ldhD 5 0.573 8 0.863 9 1.210 6.04
9 proC 8 0.632 7 0.747 7 1.390 5.57
12% ethanol ST 1 gyrB 4 0.503 3 0.296 1 0.270 1.15
2 gyrA 3 0.411 1 0.130 4 0.560 2.65
3 rrs 1 0.32 4 0.434 7 0.510 5.97
4 proC 2 0.334 6 0.479 3 0.590 2.5
5 dopIII 5 0.625 5 0.467 2 0.510 2.27
6 dnaG 6 0.673 2 0.150 6 0.660 3.05
7 ddlA 7 0.74 7 0.768 5 0.670 3.03
8 ldhD 8 0.882 9 0.880 8 1.230 6.3
9 rpoA 9 0.975 8 0.794 9 1.320 6.71
16% ethanol ST 1 proC 1 0.216 1 0.025 2 0.470 2
2 gyrB 2 0.242 1 0.025 3 0.520 2.15
3 dnaG 5 0.504 4 0.248 1 0.330 1.51
4 rrs 3 0.279 3 0.081 9 0.620 7.09
5 gyrA 4 0.391 5 0.250 5 0.620 2.88
6 dopIII 7 0.631 7 0.615 6 0.700 3.03
7 ddlA 9 0.881 9 1.038 4 0.610 2.77
8 rpoA 8 0.727 6 0.575 7 0.700 3.68
9 ldhD 6 0.572 8 0.907 8 0.760 4.02

SD (± Ct): standard deviation of the Ct; CV (%Ct), coefficient of variance expressed as a percentage of the Ct level; ST, shock treatment.