Table 1.
Primer | Sequence (5′–3′) | Target | Expected size (bp) | Reference |
---|---|---|---|---|
ERIC 1 | ATGTAAGCTCCTGGGGATTCAC | ERIC sequences | Variable | Versalovic et al.27 |
ERIC 2 | AAGTAAGTGACTGGGGTGAGC | |||
rpoF | CAACGGTGTGGTTACTGACG | rpoB | 108 | Chander et al.25 |
rpoR | TCTACGAAGTGGCCGTTTTC | |||
fimHF | CGCCTGGTCCTTTGCCTGCA | fimH | 817 | Cruz-Córdova et al.7 |
fimHR | CTGCACGTTGCCGGCGGTAA | |||
mrkAF | GTTAACGGCGGCCAGGGCAGCGA | mrkA | 382 | Cruz-Córdova et al.7 |
mrkAR | AGGTGAAACGCGCGCCATCA | |||
ecpAF | AATGGTTCACCGGGACATCATGTCC | ecpA | 759 | Cruz-Córdova et al.7 |
ecpAR | AAGGATGAAATATCGCCGACATCC | |||
qcfaF | GATGATGGAGAAAGTGAAACCAT | Ecp | 216 | This work |
qcfaR | CGTCTTATCACCAACACCTTAAC | |||
qgalFF | CAAAGGCAATTCCAAAGGAG | galF | 156 | This work |
qgalFR | GCTCGTAGGAGGTGTCGAAG | |||
qrpoDF | TAAGGAGCAAGGCTATCTGACC | rpoD | 117 | Tan et al.23 |
qrpoDR | ACCTGAATACCCATGTCGTTG |