Table 3.

List of genes present in the plastomes of the three Toona species

Function	Gene group	Gene name
Protein synthesis and DNA replication	Ribosomal RNAs	rrn4.5 (×2), rrn5 (×2), rrn16 (×2) c rrn23 (×2)
	Transfer RNAs	trnH‐GUG, trnK‐UUU a, trnQ‐UUG, trnS‐GCU, trnG‐UCC a, trnR‐UCU, trnC‐GCA, trnD‐GUC, trnY‐GUA, trnE‐UUC, trnT‐GGU, trnS‐UGA, trnG‐UCC, trnfM‐CAU, trnS‐GGA, trnT‐UGU, trnL‐UAA a, trnF‐GAA, trnV‐UAC a, trnM‐CAU, trnW‐CCA, trnP‐UGG, trnI‐CAU a (×2), trnL‐CAA (×2), trnV‐GAC (×2), trnI‐GAU (×2), trnA‐UGC a (×2), trnR‐ACG (×2), trnN‐GUU (×2), trnL‐UAG
	Small subunit	rps2, rps3, rps4, rps7 (×2), rps8, rps11, rps12 a (×2), rps14, rps15, rps16, rps18, rps19
	Ribosomal protein large subunit	rpl2 a (×2), rpl14, rpl16, rpl20, rpl22, rpl23 (×2), rpl32, rpl33, rpl36
	RNA polymerase	rpoA, rpoB, rpoC1 a, rpoC2
Photosynthesis	Photosystem I	psaA, psaB, psaC, psaI, psaJ
	Photosystem II	psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ
	Cytochrome b 6/f	petA, petB, petD, petG, petL, petN
	ATP synthase	atpA, atpB, atpE, atpF a, atpH, atpI
	NADH dehydrogenase	ndhA a, ndhB a (×2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK
	Large subunit of RuBisCO	rbcL
Miscellaneous proteins	Subunit of acetyl‐CoA‐carboxylase	accD
	c‐type cytochrome synthesis gene	ccsA
	Envelope membrane protein	cemA
	Protease	clpP a
	Translational initiation factor	infA
	Maturase	matK
Genes of unknown function	Hypothetical conserved coding frame	ycf1, ycf2 (×2), ycf3 a, ycf4

^aGenes with introns.