Skip to main content
. 2018 May 11;19:360. doi: 10.1186/s12864-018-4736-4

Table 1.

miRNA-seq quality control statistics

Sample Read category Number Percentage
L1 total reads 12,341,536 100.00%
N% > 10% 0 0.00
low quality 7942 0.06
5′ adapter contamination 1153 0.01%
3′ adapter null or insert null 280,760 2.27%
containing polyA/T/G/C 10,394 0.08%
clean reads 12,041,287 97.57%
L2 total_reads 11,037,839 100.00%
N% > 10% 0 0.00
low quality 8657 0.08
5_adapter_contamine 559 0.01%
3_adapter_null or insert_null 353,963 3.21%
with polyA/T/G/C 6319 0.06%
clean reads 10,668,341 96.65%
A1 total_reads 12,691,784 100.00%
N% > 10% 0 0.00
low quality 8732 0.07
5_adapter_contamine 452 0.00%
3_adapter_null or insert_null 266,774 2.10%
with polyA/T/G/C 5719 0.05%
clean reads 12,410,107 97.78%
A2 total_reads 12,926,796 100.00%
N% > 10% 0 0.00
low quality 9846 0.08
5_adapter_contamine 691 0.01%
3_adapter_null or insert_null 290,474 2.25%
with polyA/T/G/C 9115 0.07%
clean reads 12,616,670 97.60%