Table 2. Top 10 HKGs with the lowest average coefficient of variation.
Among the 70 shared HKGs, these 10 genes have a CV less than 0.34 and a maximum difference in CV of 0.167 (in HYAL2) across cancer subtypes.
| Coefficient of variation | ||||||
|---|---|---|---|---|---|---|
| Accession number | Gene name | Official symbol | NL | AD | SCLC | SQCLC |
| P61077 | Ubiquitin-conjugating enzyme E2 D3 | UBE2D3 | 0.204 | 0.204 | 0.142 | 0.257 |
| P61586 | Transforming protein RhoA | RHOA | 0.087 | 0.179 | 0.204 | 0.223 |
| P27348 | 14-3-3 protein theta | YWHAQ | 0.111 | 0.241 | 0.177 | 0.213 |
| Q16531 | DNA damage-binding protein 1 | DDB1 | 0.074 | 0.199 | 0.165 | 0.296 |
| Q13418 | Integrin-linked protein kinase | ILK | 0.191 | 0.229 | 0.260 | 0.193 |
| P07910 | Heterogeneous nuclear ribonucleoproteins C1/C2 | HNRNPC | 0.124 | 0.189 | 0.307 | 0.188 |
| Q12891 | Hyaluronidase-2 | HYAL2 | 0.266 | 0.194 | 0.339 | 0.172 |
| P55061 | Bax inhibitor 1 | TMBIM6 | 0.168 | 0.278 | 0.257 | 0.180 |
| P50991 | T-complex protein 1 subunit delta | CCT4 | 0.126 | 0.293 | 0.128 | 0.298 |
| Q15233 | Non-POU domain-containing octamer-binding protein | NONO | 0.081 | 0.250 | 0.234 | 0.238 |
| P01116 | Kirsten rat sarcoma viral oncogene homolog | KRAS | 0.240 | 1.027 | 0.330 | 0.262 |
| Q9UM73 | ALK receptor tyrosine kinase | ALK | 2.066 | 5.190 | 1.692 | 10.334 |
| P07949 | ret proto-oncogene | RET | 1.842 | 4.899 | 0.440 | 5.100 |
| P00533 | Epidermal growth factor receptor | EGFR | 0.413 | 1.897 | 1.408 | 0.903 |
| P08581 | Hepatocyte growth factor receptor | MET | 0.961 | 1.918 | 1.413 | 0.836 |
| P42336 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform | PIK3CA | 0.367 | 0.561 | 0.655 | 0.666 |
Notes.
Bolded gene symbols are housekeeping genes.
TITLE
- NL
- Normal Lung
- AD
- Adenocarcinoma
- SCLC
- Small Cell Lung Carcinoma
- SQCLC
- Squamous Cell Lung Carcinoma