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. 2018 May 9;6:e4719. doi: 10.7717/peerj.4719

Table 2. Top 10 HKGs with the lowest average coefficient of variation.

Among the 70 shared HKGs, these 10 genes have a CV less than 0.34 and a maximum difference in CV of 0.167 (in HYAL2) across cancer subtypes.

Coefficient of variation
Accession number Gene name Official symbol NL AD SCLC SQCLC
P61077 Ubiquitin-conjugating enzyme E2 D3 UBE2D3 0.204 0.204 0.142 0.257
P61586 Transforming protein RhoA RHOA 0.087 0.179 0.204 0.223
P27348 14-3-3 protein theta YWHAQ 0.111 0.241 0.177 0.213
Q16531 DNA damage-binding protein 1 DDB1 0.074 0.199 0.165 0.296
Q13418 Integrin-linked protein kinase ILK 0.191 0.229 0.260 0.193
P07910 Heterogeneous nuclear ribonucleoproteins C1/C2 HNRNPC 0.124 0.189 0.307 0.188
Q12891 Hyaluronidase-2 HYAL2 0.266 0.194 0.339 0.172
P55061 Bax inhibitor 1 TMBIM6 0.168 0.278 0.257 0.180
P50991 T-complex protein 1 subunit delta CCT4 0.126 0.293 0.128 0.298
Q15233 Non-POU domain-containing octamer-binding protein NONO 0.081 0.250 0.234 0.238
P01116 Kirsten rat sarcoma viral oncogene homolog KRAS 0.240 1.027 0.330 0.262
Q9UM73 ALK receptor tyrosine kinase ALK 2.066 5.190 1.692 10.334
P07949 ret proto-oncogene RET 1.842 4.899 0.440 5.100
P00533 Epidermal growth factor receptor EGFR 0.413 1.897 1.408 0.903
P08581 Hepatocyte growth factor receptor MET 0.961 1.918 1.413 0.836
P42336 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform PIK3CA 0.367 0.561 0.655 0.666

Notes.

a

Bolded gene symbols are housekeeping genes.

TITLE

NL
Normal Lung
AD
Adenocarcinoma
SCLC
Small Cell Lung Carcinoma
SQCLC
Squamous Cell Lung Carcinoma