Table 4.
GO | Genes | SNPs | Fold enrichment | +/− | P value | Phenotype |
---|---|---|---|---|---|---|
phospholipid homeostasis | HNF4A LIPG CETP GPAM |
rs2071197 rs2097055 rs883218 rs4556888 rs17369163 rs10787429 |
>100 | + | 6.53E-05 | HDL | FNK BMD |
chylomicron remnant clearance | LDLR APOB LIPC |
rs2738456 rs6733447 rs792902 rs1652519 rs6494007 rs4775046 rs12324517 |
>100 | + | 2.12E-02 | TC | FNK BMD |
Column definition: GO – gene ontology about biological process; Genes - genes corresponding to significant SNPs; SNPs - significant SNPs involved in GO terms; fold enrichment - degree of enrichment on gene sets; + and − indicated over or under-representation of a term; P value - probability of genes annotated to a particular GO term; Phenotype - principal phenotype and conditional phenotype.