Table 7.
Minor allele frequencies of the SNPs studied in the TLR3 gene in EoE patients.
TLR3 SNP | MA | Aeroallergens |
p | p c | OR (95% CI) | Food allergy |
p | p c | OR (95% CI) | ||
---|---|---|---|---|---|---|---|---|---|---|---|
Negatives (n = 54) | Positives (n = 164) | Negatives (n = 84) | Positives (n = 134) | ||||||||
rs5743303 | T | 0.255 | 0.199 | 0.2521 | NS | 0.285 | 0.175 | 0.014 | 0.048 | 0.53 (0.32–0.88) | |
rs5743305 | A | 0.362 | 0.351 | 0.8575 | NS | 0.331 | 0.367 | 0.4906 | NS | ||
rs11721827 | C | 0.011 | 0.094 | 0.0071 | 0.0255 | 9.67 (1.29–72.28) | 0.038 | 0.092 | 0.0603 | NS | |
rs7657186 | A | 0.196 | 0.204 | 0.8569 | NS | 0.190 | 0.208 | 0.6861 | NS | ||
rs13126816 | A | 0.315 | 0.303 | 0.8297 | NS | 0.294 | 0.314 | 0.698 | NS | ||
rs7668666 | A | 0.277 | 0.268 | 0.873 | NS | 0.308 | 0.250 | 0.2329 | NS | ||
rs3775292 | C | 0.234 | 0.196 | 0.4262 | NS | 0.223 | 0.196 | 0.5358 | NS | ||
rs3775291 | T | 0.394 | 0.326 | 0.2337 | NS | 0.346 | 0.342 | 0.9308 | NS |
SNPs: single-nucleotide polymorphisms; TLR3: Toll-like receptor 3; EoE: eosinophilic esophagitis; MA: minor allele; OR (95%CI): odds ratio with 95% confidence interval; NS: not significant p > 0.05.
pc: corrected p value, 10,000-fold permutation testing.