Table 1. Spectral and physico-chemical properties of the first set of synthesised X-rhodamines (5 μM in MOPS 30 mM, 100 mM KCl) a .
Compound |
λabsmax (nm) | λem d (nm) | Log ε (λabsmax) (M–1 cm–1) | Φ | Φ ON/ΦOFF | Dynamic range e | Dynamic range @ pH ± 1 pKa f | pKa | |
HR-pOH | ON b | 576 | 587 | 4.78 | 0.55 | 9 | 34 | 30 | 8.97 |
OFF c | 579 f | 598 | 4.53 | 0.06 | ±0.05 | ||||
HR-mOH | ON b | 578 | 602 | 4.70 | 0.30 | 3 | 132 | 75 | 9.33 |
OFF c | 577 | 603 | 4,63 | 0.11 | ±0.13 | ||||
HR-oOH | ON b | 581 | 603 | 4.89 | 0.75 | 3 | 866 | 460 | 9.68 |
OFF c | 579 | 603 | 4.69 | 0.27 | ±0.17 | ||||
HR-Me | ON b | 574 | 597 | 4.71 | 0.09 | High | 955 | 833 | 8.75 |
OFF c | N/A g | 598 | N/A g | N/A h | ±0.16 | ||||
HR-OMe | ON b | 577 | 598 | 4,72 | 0.22 | 8 | 302 | N/A i | N/A i |
OFF c | 576 | 600 | 4.74 | 0.03 | |||||
HR-Cl | ON b | 579 | 601 | 4.68 | 0.47 | High | 753 | 512 | 6.17 |
OFF c | 544 | 599 | 4.52 | N/A h | ±0.10 | ||||
Hr-Br | ON b | 581 | 601 | 4.39 | 0.55 | High | 384 | 291 | 6.51 |
OFF c | 544 | 600 | 4.40 | N/A h | ±0.10 | ||||
p-Nph | ON b | 581 | 600 | 4.79 | 0.28 | 6 | 23 | 9.7 | 8.51 |
OFF c | 579 | 602 | 4.34 | 0.05 | ±0.17 | ||||
o-Nph | ON b | 584 | 604 | 4.43 | 0.77 | 8 | 337 | 166 | 8.73 |
OFF c | 576 | 604 | 4.46 | 0.10 | ±0.17 | ||||
Pip-H | ON b | 578 | 600 | 4.88 | 0.16 | 4 | 6 | 3.9 | 8.67 |
OFF c | 579 | 601 | 4.84 | 0.04 | ±0.07 | ||||
Pip-Alkyne | ON b | 577 | 600 | 4.98 | 0.34 | 2 | 3 | 1.9 | 4.95 |
OFF c | 579 | 602 | 4.45 | 0.15 | ±0.09 | ||||
Imidazole | ON b | 583 | 609 | 4.80 | 0.40 | N/A j | N/A j | N/A j | N/A j |
OFF c | 584 | 608 | N/A j | N/A j |
a ε = molar extinction coefficient, λ = wavelength, Φ = quantum yield.
bProtonated form: pH 4.
cDeprotonated form: pH 10.
dExcitation at 535 nm.
e[(Imax – Imin)/Imin] with I = fluorescence intensity.
fFluorescence enhancement between ±1 pH unit around the pKa value.
gBroad absorbance.
hNon-fluorescent.
ipKa value was too high.
jNo pH sensitivity.