FIGURE 3.

The location of genome variations on the reference P-8 genome. The P-8 chromosome, showing the distribution of the SNPs (red: non-synonymous SNPs, green: synonymous SNPs, gray: intergenic SNPs), is shown above the dotted line. The seven plasmids of P-8 are shown below the dotted line. For LBPp1 and LBPp2, the red regions show the positions of the transposases. For plasmids LBPp1, LBPp2, LBPp4, and LBPp7, each ring, from inside to outside, represents a loss type. The black rings (entirely loss) and gray arcs (partially loss) indicate the plasmid loss regions, and the gray levels show the different plasmid loss ratios (PLRs).