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. 2018 May 15;1(1):41–53.

Figure 6.

Figure 6

Expression of the UHHU genes. 10 μg total cell RNA from cells transfected with the UHH156 gene lanes 1, 4, and 5) or the UHHU117 gene (lanes 2, 3, and 6) were analyzed by S1 nuclease mapping. The UHU156 gene labeled at the 3′ end of the Narl site as a probe in lanes 1 and 2. The UHHU117 or UHHU156 gene labeled at the Narl site was used as a probe in lanes 3 and 4 respectively. The 5′ ends of the genes were analyzed in lanes 5 and 6 using the U5H gene labeled at the 5′ end of the NarI site as a probe as in Figure 3B. Lane M is marker pUC18 digested with HpaII. The protected fragments are: H2aH-protection of the endogenous hamster H2a mRNAs; H2aM–protection by transcripts extending to the 3′ end of the mouse H2a–614 gene; T–protection by all transcripts from the UHHU genes to the point of divergence between the UHHU gene and the UHU156 gene; U1–protection by transcripts initiating at the U1 start site. Band P is unprotected probe DNA. A schematic of the S1 nuclease assays is shown below the figure.