Table 4.
(A) Number of total rhythmic genes of forward (F) and reverse (R) reads of protein-coding CGTs and (B) of dataset B-C, P, Bs, C and Eu. (C) Number of rhythmic genes obtained by recruitment analysis of L. aestuarii PCC8106, C. chthonoplastes CCY9604, C. litoralis KT71, R. denitrificans Och114 and A. vinosum DSM180. Displayed numbers where filtered for 20–24 h cycle periods and p ≤ 0.05/0.01. P = B-C and BS = B-C displays amount of shared rhythmic genes between the P/Bs and B-C dataset. The fractions of the total CGTs/genes are given
| Database/ reference genome | Rhythmic genes (#) p ≤ 0.05 |
Rhythmic genes (#) p ≤ 0.01 |
% of initial CGTs/genes | |
|---|---|---|---|---|
| A | CGT-Fa | 188 | 79 | 0.78 |
| CGT-Ra | 205 | 8 | 0.85 | |
| B | B-C | 265 | 115 | 8.5 |
| P | 220 | 109 | 7.1 | |
| Bs | 119 | 47 | 8.2 | |
| C | 91 | 32 | 5.9 | |
| Eu | 36 | 13 | 5.4 | |
| P = B-C | 137 | |||
| Bs = B-C | 48 | |||
| C | L. aestuarii | 613 | 203 | 10 |
| C. chthonoplastes | 105 | 23 | 1.6 | |
| R. denitrificans | 81 | 5 | 9 | |
| A. vinosum | 44 | 2 | 2 | |
| C. litoralis | 35 | 4 | 5.3 |
aProtein-coding