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. Author manuscript; available in PMC: 2018 May 16.
Published in final edited form as: Biochemistry. 2016 Aug 11;55(33):4654–4665. doi: 10.1021/acs.biochem.6b00472

Figure 6. Hydroxyl group of malate hydrogen bonds to leaving oxygen of phosphate during molecular dynamics.

Figure 6

Substrate structure and malate hydrogen bonding partners at 289 ps during molecular dynamics, subunit A. Malate’s hydroxyl group is in a 1.9 Å hydrogen bond to the oxygen of the UDP leaving group. Atom colors are shown as they are in Figure 5. For clarity, only the side chains of amino acid residues are shown, with the exception of Ser 17.