Table 7.

Physical position, P-value, effect, and distance to known QTL or known genes of QTN for protein and oil content (PR/OL), oil content only (OL) and protein content only (PR) using FarmCPU.

Trait	Chr	LG	Position	P-value	Effect on PR	Effect on OL	Distance to known QTL or gene	QTL information from SoyBase
PR/OL	1	D1a	8869097	0.002549	0.00955	−0.62331	1,140	Seed protein 3-5 (Brummer et al., 1997)
							1,140	Seed oil 42-20 (Han et al., 2015)
	5	A1	37361373	0.002501	−0.5009	0.387996	2,900	Seed protein 41-1(Jun et al., 2008)
							346	Seed oil 4-2 (Brummer et al., 1997)
	8	A2	8613057	0.001182	2.506472	−1.08523	17	Seed protein 26-1 (Reinprecht et al., 2006)
							579	Seed oil 30-3 (Liang et al., 2010)
	13	F	13865497	0.000118	1.287005	−0.82343	753	Seed protein 36-22 (Mao et al., 2013)
							1,441	Seed oil 24-4 (Qi et al., 2011)
	16	J	4582681	0.003177	1.316393	−0.75341	382	Seed protein 4-7 (Lee et al., 1996)
							370	Seed oil 43-20 (Mao et al., 2013)
	17	D2	11939572	0.002254	1.1395	−0.50493	302	Seed protein 37-6 (Wang et al., 2014)
							570	Seed Oil-011 (Qi et al., 2011)
	18	G	3737376	0.004217	0.477983	−0.31451	111	Seed protein 20-1 (Panthee et al., 2005)
							1,431	Seed oil 42-31 (Han et al., 2015)
	18	G	43143230	0.000556	1.004969	−0.44686
							1,612	Seed oil 42-33 (Han et al., 2015)
	19	L	809351	0.002534	−0.93037	0.502982	34	Seed protein 41-8 (Jun et al., 2008)
							423	Seed oil 43-27 (Mao et al., 2013)
	20	I	2366428	0.003448	0.431691	−0.45203	319	Seed protein 26-4 (Reinprecht et al., 2006)
							319	Seed oil 14-3 (Csanádi et al., 2001)
	20	I	20469935	0.002656	0.76146	−0.47998	3,710	Seed protein 1-2 (Diers et al., 1992)
							3,708	Seed oil 2-2 (Csanádi et al., 2001)
PR	5	A1	37987063	0.002457	0.621571	–	1,850	Seed protein-011 (Pathan et al., 2013)
OL	7	M	8251563	0.000152	–	−0.87557	31	Seed oil 23-6 (Hyten et al., 2004)
	8	A2	3823489	0.00048	–	0.420013	1,949	Seed oil 24-1 (Qi et al., 2011)
	11	B1	10752436	0.001861	–	−0.77553	749	Seed oil 39-2 (Wang et al., 2014)
	20	I	39264676	0.002104	–	−0.53353	1,002	Seed oil 42-39 (Han et al., 2015)

Only QTN that was detected more than three environments were listed.