Table 1.
Assembly Features | |
---|---|
Nº scaffolds | 3,429 |
Longest scaffold | 61,306 |
Shortest scaffold | 300 |
Number of scaffold > 1 Kb | 89.7 % |
Number of scaffolds > 10 Kb | 38.8 % |
N50 | 18,177 |
L50 | 1,6481,489 bp |
Mapping features | |
Total reads | 56,409,304 |
Mapped reads | 51,384,356 |
Mapped reads % | 91 |
Mean depth | 134 |
Total gaps size | 1,530,826 |
Nº of gaps > 50 bp | 2,751 |
Homozygous | 176,188 |
Heterozygous | 24,694 |
Indels | 16,086 |