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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2018 Jan 19;74(Pt 2):180–183. doi: 10.1107/S2056989018000841

Crystal structure of a palladium(II) complex containing the wide bite-angle bis­(selenium) ligand, cis-[(tBuNH)(Se)P(μ-NtBu)2P(Se)(NHtBu)]

Austin Bonnette a, Joel T Mague b, Perumalreddy Chandrasekaran a,*
PMCID: PMC5956332  PMID: 29850049

A palladium(II) complex containing a bis­(selenium) ligand based on cyclo­diphosph(V)azane, cis-[(tBuNH)(Se)P(μ-NtBu)2P(Se)(NHtBu)] has been synthesized and structurally characterized. The crystal structure revels chelation of ligand through selenium donors with a natural bite-angle of 110.54 (1)°

Keywords: crystal structure, selenium ligand, palladium(II) complex, P-N compounds, cyclo­diphosphaza­nes, bite-angle

Abstract

A palladium(II) complex {systematic name: dichlorido[1,3-di-tert-butyl-2,4-bis(tert-butylamino)-1,3,2λ5,4λ5-diazadiphosphetidine-2,4-diselone-κ2 Se,Se′]pal­ladium(II)}, cis-[PdCl2{I}], (II), containing a bis­(selenium) ligand based on cyclo­diphosph(V)azane, cis-[(tBuNH)(Se)P(μ-NtBu)2P(Se)(NHtBu)], (I), has been synthesized and structurally characterized. The crystal structure of complex II reveals that the ligand chelates through selenium donors with the natural bite-angle of 110.54 (1)° and a Pd—Se bond distance of 2.444 (1) Å. The coordination around PdII shows a slightly distorted square-planar geometry, as indicated by the angle between the [PdCl2] and [PdSe2] planes of 5.92 (3)°. In the crystal, the mol­ecules are inter­linked through weak N—H⋯Cl and C—H⋯Cl hydrogen-bonding inter­actions.

Chemical context  

Cyclo­diphosph(III)aza­nes are four-membered PIII–N ring systems with general formula, cis-[RP(μ-NtBu)2PR]. The planar nature of the four-membered ring favors a bridging bidentate coordination mode through phospho­rus donors rather than chelation, to afford structurally inter­esting macrocyclic and polymeric complexes (Balakrishna, 2016). The main-group chemistry of the corresponding PV analogue cyclo­diphosph(V)aza­nes, cis-[R(E)P(μ-NtBu)2P(E)R] (E = O, S, Se, and Te; R = NHtBu) and its amide derivatives has been studied extensively by Stahl (2000) and Briand and co-workers (Briand et al., 2002). While examples of coordination of cyclo­diphosph(V)aza­nes with transition metal ions are scarce, the sulfur and selenium derivatives are especially inter­esting as they have a special affinity for soft metals and have the potential to form complexes with wide natural bite-angles through chelation (Chivers et al., 2001). Several late transition-metal complexes containing wide natural bite-angle chelating ligands (LML = 100–134°) have been developed over the years and have shown promising catalytic activity for several reactions (Kamer et al., 2001). The majority of these wide bite-angle ligands are phospho­rus and/or nitro­gen donor ligands (Motolko et al., 2017; Czauderna et al., 2015). Herein we report the synthesis and crystal structure of the palladium(II) complex (II) with a wide bite-angle selenium ligand based on cyclo­diphosph(V)azane cis-[(tBuNH)(Se)P(μ-NtBu)2P(Se)(NHtBu)], (I).graphic file with name e-74-00180-scheme1.jpg

Structural commentary  

A perspective view of the mol­ecular structure of the PdII complex (II) is presented in Fig. 1. The crystal structure of II confirms the chelation of cis-[(tBuNH)(Se)P(μ-NtBu)2P(Se)(NHtBu)] (I) through selenium donors to the [PdCl2] moiety, with a Se1—Pd1—Se2 natural bite-angle of 110.54 (1)°. The rigid four-membered cyclo­diphosphazane [P(μ-NtBu)2P] ligand backbone enforces large natural bite-angles. The Se1—Pd1—Cl1 and Se2—Pd1—Cl2 bond angles are 79.27 (2) and 79.36 (2)°, respectively, smaller than the natural square-planar angle, whereas the Cl1—Pd1—Cl2 angle [91.19 (2)°] is closer to the typical value for a square-planar angle. In complex II, the exocyclic Se1—P1—N3 and Se2—P2—N4 angles at 114.32 (7) and 117.13 (7)°, respectively, are slightly larger than the corresponding angle in the uncoordin­ated ligand I [107.3 (1) and 113.2 (1)°; Chivers et al., 2002]. In complex II, the palladium atom shows a slight tetra­hedral distortion from a square-planar geometry, as indicated by the dihedral angle between the Se1/Pd1/Se2 and Cl1/Pd1/Cl2 planes of 5.92 (3)°. The Pd1—Se1 and Pd1—Se2 bond distances are 2.4458 (3) and 2.4440 (3) Å, respectively, and are in the typical range for PdII complexes with selenium ligands (Das et al., 2009). In complex II, the P1—Se1 and P2—Se2 bond distances are 2.1543 (6) and 2.1654 (6) Å, respectively; these bonds are slightly elongated compared to the P—Se bond [2.078 (1) Å] in the uncoordinated ligand (I). This may be a result of the coordination of Se to the Pd center. The Pd—Cl bond distances [Pd1—Cl1 = 2.3381 (6) and Pd1—Cl2 = 2.3159 (6) Å] are consistent with those reported for PdII complexes with Se donor ligands (Saleem et al., 2013). The [P(μ-NtBu)2P] ring in complex II is greatly puckered, as indicated by the angle of 22.61 (2)° between the N1/P1/N2 and N1/P2/N2 planes. The corresponding dihedral angle for the uncoordinated ligand is 3.73 (2)°.

Figure 1.

Figure 1

Perspective view of palladium complex II with displacement ellipsoids drawn at the 50% probability level. All H atoms have been omitted for clarity except at N3 and N4. Only the major occupancy component of the disordered t-butyl group is shown.

Supra­molecular features  

In the crystal, the mol­ecules are connected through weak N—H⋯Cl and C—H⋯Cl hydrogen-bonding inter­actions (Fig. 2, Table 1). Inter­estingly, in the solid-state structure II, the exocyclic nitro­gen substitutents are arranged in an endo, endo fashion, whereas in ligand I they are arranged in exo, endo orientations (Chivers et al., 2002). An overlay plot of the free ligand mol­ecule I with the ligand fragment of II is shown in Fig. 3. This conformational change upon coordination is possibly caused by the formation of inter­molecular hydrogen-bonding inter­actions. A similar conformational change influenced by hydrogen-bonding inter­actions has previously been noted (Chandrasekaran et al., 2011).

Figure 2.

Figure 2

Hydrogen-bonding inter­actions in the crystal lattice.

Table 1. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
N4—H4⋯Cl1i 0.91 2.45 3.317 (2) 159
N3—H3⋯Cl1i 0.91 2.57 3.4160 (19) 155
C16—H16A⋯Cl2ii 0.98 2.82 3.746 (5) 157
C14A—H14E⋯Cl2ii 0.98 2.82 3.742 (7) 157

Symmetry codes: (i) Inline graphic; (ii) Inline graphic.

Figure 3.

Figure 3

Overlay of the uncoordinated ligand I (gray) with the coordinated ligand fragment in complex II (purple).

Synthesis and crystallization  

The ligand cis-[(tBuHN)(Se)P(μ-tBuN)2P(Se)(NHtBu)], (I), was prepared following a reported procedure (Chivers et al., 2002).

A di­chloro­methane solution (10 mL) of [Pd(COD)Cl2] (100 mg, 0.35 mmol) was added dropwise to a solution of cis-[(tBuHN)(Se)P(μ-tBuN)2P(Se)(NHtBu)] (175 mg, 0.35 mmol) in 10 mL of CH2Cl2 under an N2 atmosphere at ambient temperature. The resultant dark-orange solution was stirred for 6 h. The solution was then concentrated to 10 mL, diluted with 10 mL of pentane, and stored at 248 K for a day to afford the analytically pure orange crystalline product. X-ray quality crystals were obtained by slow evaporation from a DMF solution at room temperature. Yield: 76% (206 mg, 0.067 mmol), m.p. 455–457 K.

1H NMR (400 MHz, DMSO-d 6): 1.44 (s, 18H, tBu), 1.57 (s, 18H, tBu), 2.3 (br s, 2H, NH). IR (cm−1): 3175 (br w), 2974 (w), 1469 (w), 1392 (w), 1367 (m), 1367 (m), 1227 (m), 1184 (s), 1028 (s), 893 (s), 837 (w), 733 (m), 683 (m). Absorption spectrum [CH2Cl2; λmax, nm (∊M, M−1cm−1)]: 247 (12068), 294 (15752), 355 (6827). Analysis calculated for C16H38N4P2Se2PdCl2: C, 28.11; H, 5.60; N, 8.19. Found: C, 28.37; H, 6.01; N, 28.74.

Refinement  

Crystal data, data collection and structure refinement details are summarized in Table 2. All H atoms attached to carbon were placed in calculated positions (C—H = 0.98 Å), while those attached to nitro­gen were placed in locations derived from a difference-Fourier map and their coordinates adjusted to give N—H = 0.91 Å. All were included as riding contributions with U iso(H) = 1.2-1.5 times those of the parent atoms. The t-butyl group attached to N4 was modeled as rotationally disordered over two sites of approximately equal population. These were refined with restraints so that the geometries of the two components of the disorder are comparable.

Table 2. Experimental details.

Crystal data
Chemical formula [PdCl2(C16H38N4P2Se2)]
M r 683.66
Crystal system, space group Orthorhombic, P b c a
Temperature (K) 150
a, b, c (Å) 17.3733 (10), 15.7184 (9), 19.5052 (11)
V3) 5326.5 (5)
Z 8
Radiation type Mo Kα
μ (mm−1) 3.76
Crystal size (mm) 0.18 × 0.13 × 0.12
 
Data collection
Diffractometer Bruker SMART APEX CCD
Absorption correction Numerical (SADABS; Bruker, 2013)
T min, T max 0.44, 0.66
No. of measured, independent and observed [I > 2σ(I)] reflections 94164, 7112, 6053
R int 0.053
(sin θ/λ)max−1) 0.686
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.027, 0.064, 1.03
No. of reflections 7112
No. of parameters 251
No. of restraints 45
H-atom treatment H-atom parameters constrained
Δρmax, Δρmin (e Å−3) 1.10, −0.82

Computer programs: APEX2 and SAINT (Bruker, 2013), SHELXT (Sheldrick, 2015a ), SHELXL2014 (Sheldrick, 2015b ), Mercury (Macrae et al., 2006) and SHELXTL (Sheldrick, 2008).

Supplementary Material

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989018000841/nk2239sup1.cif

e-74-00180-sup1.cif (2.8MB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018000841/nk2239Isup2.hkl

e-74-00180-Isup2.hkl (565.4KB, hkl)

CCDC reference: 1549758

Additional supporting information: crystallographic information; 3D view; checkCIF report

supplementary crystallographic information

Crystal data

[PdCl2(C16H38N4P2Se2)] Dx = 1.705 Mg m3
Mr = 683.66 Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pbca Cell parameters from 9629 reflections
a = 17.3733 (10) Å θ = 2.4–29.1°
b = 15.7184 (9) Å µ = 3.76 mm1
c = 19.5052 (11) Å T = 150 K
V = 5326.5 (5) Å3 Block, orange
Z = 8 0.18 × 0.13 × 0.12 mm
F(000) = 2720

Data collection

Bruker SMART APEX CCD diffractometer 7112 independent reflections
Radiation source: fine-focus sealed tube 6053 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.053
Detector resolution: 8.3660 pixels mm-1 θmax = 29.2°, θmin = 2.0°
φ and ω scans h = −23→23
Absorption correction: numerical (SADABS; Bruker, 2013) k = −21→21
Tmin = 0.44, Tmax = 0.66 l = −26→26
94164 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027 Hydrogen site location: mixed
wR(F2) = 0.064 H-atom parameters constrained
S = 1.03 w = 1/[σ2(Fo2) + (0.0283P)2 + 6.7911P] where P = (Fo2 + 2Fc2)/3
7112 reflections (Δ/σ)max = 0.002
251 parameters Δρmax = 1.10 e Å3
45 restraints Δρmin = −0.82 e Å3

Special details

Experimental. The diffraction data were obtained from 3 sets of 400 frames, each of width 0.5° in ω, collected at φ = 0.00, 90.00 and 180.00° and 2 sets of 800 frames, each of width 0.45° in φ, collected at ω = –30.00 and 210.00°. The scan time was 10 sec/frame.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.98 Å) while those attached to nitrogen were placed in locations derived from a difference map and their coordinates adjusted to give N—H = 0.91 Å. All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms. The t-butyl group attached to N4 is rotationally disordered over two sites of approximately equal population. These were refined with restraints that the geometries of the two components of the disorder be comparable.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq Occ. (<1)
Pd1 0.82807 (2) 0.37109 (2) 0.32897 (2) 0.01569 (5)
Se1 0.79075 (2) 0.43142 (2) 0.21827 (2) 0.01764 (6)
Se2 0.71420 (2) 0.33024 (2) 0.39476 (2) 0.02033 (6)
Cl1 0.94805 (3) 0.41297 (5) 0.28642 (3) 0.02943 (14)
Cl2 0.88507 (4) 0.31003 (5) 0.42436 (3) 0.03151 (15)
P1 0.66761 (3) 0.41544 (4) 0.21683 (3) 0.01258 (10)
P2 0.61982 (3) 0.35870 (4) 0.32597 (3) 0.01408 (11)
N1 0.63567 (10) 0.32168 (11) 0.24642 (9) 0.0142 (3)
N2 0.62529 (10) 0.45475 (11) 0.28785 (9) 0.0138 (3)
N3 0.62727 (10) 0.44265 (13) 0.14563 (9) 0.0180 (4)
H3 0.575137 0.441740 0.150051 0.022*
N4 0.53418 (11) 0.33921 (13) 0.35323 (10) 0.0203 (4)
H4 0.498851 0.355468 0.321389 0.024*
C1 0.64163 (14) 0.23290 (15) 0.21846 (13) 0.0224 (5)
C2 0.72478 (16) 0.21282 (19) 0.20073 (19) 0.0418 (8)
H2A 0.741606 0.249383 0.162896 0.063*
H2B 0.729027 0.153044 0.186953 0.063*
H2C 0.757368 0.223065 0.240900 0.063*
C3 0.5901 (2) 0.22733 (19) 0.15545 (16) 0.0417 (7)
H3A 0.537340 0.242791 0.168043 0.063*
H3B 0.590870 0.169072 0.137562 0.063*
H3C 0.609019 0.266535 0.120197 0.063*
C4 0.61299 (18) 0.17126 (17) 0.27283 (16) 0.0358 (6)
H4A 0.644908 0.176515 0.314045 0.054*
H4B 0.616222 0.112953 0.255264 0.054*
H4C 0.559394 0.184560 0.284242 0.054*
C5 0.62346 (14) 0.54289 (15) 0.31730 (12) 0.0201 (5)
C6 0.55892 (19) 0.54603 (18) 0.36997 (16) 0.0422 (8)
H6A 0.510622 0.527885 0.348517 0.063*
H6B 0.553355 0.604315 0.387109 0.063*
H6C 0.571202 0.507919 0.408193 0.063*
C7 0.69939 (18) 0.56807 (18) 0.35043 (16) 0.0361 (7)
H7A 0.710827 0.529084 0.388296 0.054*
H7B 0.695567 0.626300 0.368064 0.054*
H7C 0.740675 0.565045 0.316289 0.054*
C8 0.60370 (16) 0.60309 (16) 0.25870 (14) 0.0289 (5)
H8A 0.644157 0.600390 0.223758 0.043*
H8B 0.599801 0.661335 0.276281 0.043*
H8C 0.554417 0.586272 0.238353 0.043*
C9 0.65722 (14) 0.46705 (17) 0.07581 (11) 0.0235 (5)
C10 0.70489 (17) 0.3951 (2) 0.04504 (14) 0.0360 (6)
H10A 0.750172 0.384783 0.073815 0.054*
H10B 0.721499 0.411007 −0.001237 0.054*
H10C 0.673625 0.343287 0.042754 0.054*
C11 0.58469 (16) 0.4814 (2) 0.03314 (13) 0.0355 (7)
H11A 0.553537 0.429424 0.033088 0.053*
H11B 0.599201 0.495780 −0.014006 0.053*
H11C 0.554791 0.528195 0.052961 0.053*
C12 0.70387 (17) 0.54828 (19) 0.07905 (14) 0.0338 (6)
H12A 0.672869 0.593370 0.100063 0.051*
H12B 0.718703 0.565358 0.032569 0.051*
H12C 0.750228 0.538698 0.106606 0.051*
C13 0.49714 (15) 0.30323 (18) 0.41632 (12) 0.0295 (6)
C14 0.4321 (4) 0.2471 (5) 0.3901 (3) 0.0556 (8) 0.548 (3)
H14A 0.401481 0.278775 0.356477 0.083* 0.548 (3)
H14B 0.453769 0.196251 0.368310 0.083* 0.548 (3)
H14C 0.399206 0.230116 0.428518 0.083* 0.548 (3)
C15 0.4492 (4) 0.3798 (4) 0.4498 (3) 0.0556 (8) 0.548 (3)
H15A 0.414712 0.404302 0.415257 0.083* 0.548 (3)
H15B 0.418821 0.358301 0.488360 0.083* 0.548 (3)
H15C 0.484838 0.423715 0.466105 0.083* 0.548 (3)
C16 0.5472 (3) 0.2673 (5) 0.4654 (3) 0.0556 (8) 0.548 (3)
H16A 0.517051 0.245880 0.504238 0.083* 0.548 (3)
H16B 0.575834 0.220258 0.444540 0.083* 0.548 (3)
H16C 0.583308 0.310757 0.481535 0.083* 0.548 (3)
C14A 0.4149 (4) 0.3018 (6) 0.4084 (4) 0.0556 (8) 0.452 (3)
H14D 0.401634 0.273183 0.365383 0.083* 0.452 (3)
H14E 0.391776 0.271054 0.446940 0.083* 0.452 (3)
H14F 0.395302 0.360261 0.407521 0.083* 0.452 (3)
C15A 0.5291 (4) 0.3444 (5) 0.4791 (3) 0.0556 (8) 0.452 (3)
H15D 0.585444 0.341047 0.478162 0.083* 0.452 (3)
H15E 0.513235 0.404196 0.480458 0.083* 0.452 (3)
H15F 0.509709 0.314989 0.519877 0.083* 0.452 (3)
C16A 0.5256 (4) 0.2064 (4) 0.4239 (4) 0.0556 (8) 0.452 (3)
H16D 0.581653 0.205263 0.429416 0.083* 0.452 (3)
H16E 0.501260 0.180603 0.464190 0.083* 0.452 (3)
H16F 0.511218 0.174341 0.382781 0.083* 0.452 (3)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Pd1 0.00934 (8) 0.02154 (9) 0.01619 (8) 0.00250 (6) −0.00299 (6) −0.00155 (6)
Se1 0.00884 (10) 0.02754 (13) 0.01654 (10) −0.00158 (8) −0.00016 (7) 0.00226 (8)
Se2 0.01424 (11) 0.02861 (13) 0.01812 (11) −0.00049 (9) −0.00335 (8) 0.00731 (9)
Cl1 0.0094 (2) 0.0534 (4) 0.0255 (3) −0.0011 (2) −0.0001 (2) −0.0038 (3)
Cl2 0.0230 (3) 0.0455 (4) 0.0260 (3) 0.0080 (3) −0.0106 (2) 0.0073 (3)
P1 0.0090 (2) 0.0153 (3) 0.0134 (2) 0.00044 (19) −0.00020 (18) 0.00051 (19)
P2 0.0099 (2) 0.0170 (3) 0.0154 (2) −0.0007 (2) −0.00030 (19) 0.00305 (19)
N1 0.0138 (8) 0.0129 (9) 0.0159 (8) 0.0001 (7) 0.0002 (7) −0.0006 (6)
N2 0.0127 (8) 0.0136 (9) 0.0150 (8) 0.0007 (7) 0.0022 (6) 0.0009 (6)
N3 0.0101 (8) 0.0276 (11) 0.0161 (8) 0.0001 (7) −0.0021 (7) 0.0044 (7)
N4 0.0115 (9) 0.0320 (11) 0.0173 (9) −0.0032 (8) 0.0008 (7) 0.0094 (8)
C1 0.0206 (11) 0.0143 (11) 0.0323 (13) 0.0007 (9) −0.0015 (9) −0.0062 (9)
C2 0.0291 (15) 0.0266 (15) 0.070 (2) 0.0043 (12) 0.0118 (14) −0.0188 (14)
C3 0.054 (2) 0.0257 (15) 0.0453 (17) −0.0056 (14) −0.0199 (15) −0.0098 (12)
C4 0.0391 (16) 0.0162 (13) 0.0520 (18) −0.0035 (11) −0.0010 (13) 0.0026 (11)
C5 0.0247 (12) 0.0152 (11) 0.0204 (11) 0.0031 (9) 0.0029 (9) −0.0033 (8)
C6 0.055 (2) 0.0264 (14) 0.0454 (17) 0.0077 (14) 0.0282 (15) −0.0056 (12)
C7 0.0407 (16) 0.0257 (14) 0.0420 (16) 0.0014 (12) −0.0149 (13) −0.0123 (12)
C8 0.0333 (14) 0.0178 (12) 0.0357 (14) 0.0025 (11) −0.0008 (11) 0.0037 (10)
C9 0.0217 (11) 0.0364 (14) 0.0125 (10) −0.0039 (10) −0.0019 (8) 0.0050 (9)
C10 0.0337 (15) 0.0534 (19) 0.0207 (12) 0.0019 (13) 0.0058 (11) −0.0034 (12)
C11 0.0314 (14) 0.0517 (18) 0.0235 (12) −0.0045 (13) −0.0128 (11) 0.0115 (12)
C12 0.0344 (15) 0.0417 (16) 0.0251 (13) −0.0143 (13) −0.0037 (11) 0.0102 (11)
C13 0.0284 (13) 0.0402 (15) 0.0197 (11) −0.0126 (12) 0.0065 (10) 0.0086 (10)
C14 0.0535 (17) 0.076 (2) 0.0375 (15) −0.0114 (17) 0.0209 (13) 0.0186 (14)
C15 0.0535 (17) 0.076 (2) 0.0375 (15) −0.0114 (17) 0.0209 (13) 0.0186 (14)
C16 0.0535 (17) 0.076 (2) 0.0375 (15) −0.0114 (17) 0.0209 (13) 0.0186 (14)
C14A 0.0535 (17) 0.076 (2) 0.0375 (15) −0.0114 (17) 0.0209 (13) 0.0186 (14)
C15A 0.0535 (17) 0.076 (2) 0.0375 (15) −0.0114 (17) 0.0209 (13) 0.0186 (14)
C16A 0.0535 (17) 0.076 (2) 0.0375 (15) −0.0114 (17) 0.0209 (13) 0.0186 (14)

Geometric parameters (Å, º)

Pd1—Cl2 2.3159 (6) C8—H8A 0.9800
Pd1—Cl1 2.3381 (6) C8—H8B 0.9800
Pd1—Se2 2.4440 (3) C8—H8C 0.9800
Pd1—Se1 2.4458 (3) C9—C12 1.514 (4)
Se1—P1 2.1543 (6) C9—C10 1.525 (4)
Se2—P2 2.1654 (6) C9—C11 1.527 (3)
P1—N3 1.6132 (18) C10—H10A 0.9800
P1—N1 1.6773 (19) C10—H10B 0.9800
P1—N2 1.6855 (18) C10—H10C 0.9800
P2—N4 1.6093 (19) C11—H11A 0.9800
P2—N1 1.6799 (18) C11—H11B 0.9800
P2—N2 1.6856 (19) C11—H11C 0.9800
N1—C1 1.502 (3) C12—H12A 0.9800
N2—C5 1.500 (3) C12—H12B 0.9800
N3—C9 1.508 (3) C12—H12C 0.9800
N3—H3 0.9099 C13—C16 1.411 (6)
N4—C13 1.499 (3) C13—C14A 1.437 (7)
N4—H4 0.9099 C13—C15A 1.492 (7)
C1—C2 1.519 (4) C13—C14 1.522 (6)
C1—C4 1.520 (4) C13—C15 1.602 (6)
C1—C3 1.523 (4) C13—C16A 1.607 (7)
C2—H2A 0.9800 C14—H14A 0.9800
C2—H2B 0.9800 C14—H14B 0.9800
C2—H2C 0.9800 C14—H14C 0.9800
C3—H3A 0.9800 C15—H15A 0.9800
C3—H3B 0.9800 C15—H15B 0.9800
C3—H3C 0.9800 C15—H15C 0.9800
C4—H4A 0.9800 C16—H16A 0.9800
C4—H4B 0.9800 C16—H16B 0.9800
C4—H4C 0.9800 C16—H16C 0.9800
C5—C7 1.521 (4) C14A—H14D 0.9800
C5—C6 1.522 (3) C14A—H14E 0.9800
C5—C8 1.523 (3) C14A—H14F 0.9800
C6—H6A 0.9800 C15A—H15D 0.9800
C6—H6B 0.9800 C15A—H15E 0.9800
C6—H6C 0.9800 C15A—H15F 0.9800
C7—H7A 0.9800 C16A—H16D 0.9800
C7—H7B 0.9800 C16A—H16E 0.9800
C7—H7C 0.9800 C16A—H16F 0.9800
Cl2—Pd1—Cl1 91.19 (2) H8A—C8—H8B 109.5
Cl2—Pd1—Se2 79.364 (18) C5—C8—H8C 109.5
Cl1—Pd1—Se2 169.114 (17) H8A—C8—H8C 109.5
Cl2—Pd1—Se1 169.511 (19) H8B—C8—H8C 109.5
Cl1—Pd1—Se1 79.267 (17) N3—C9—C12 111.2 (2)
Se2—Pd1—Se1 110.536 (10) N3—C9—C10 110.8 (2)
P1—Se1—Pd1 103.275 (17) C12—C9—C10 110.6 (2)
P2—Se2—Pd1 103.496 (18) N3—C9—C11 104.19 (19)
N3—P1—N1 112.67 (10) C12—C9—C11 109.9 (2)
N3—P1—N2 114.88 (9) C10—C9—C11 110.1 (2)
N1—P1—N2 83.97 (9) C9—C10—H10A 109.5
N3—P1—Se1 114.32 (7) C9—C10—H10B 109.5
N1—P1—Se1 115.25 (7) H10A—C10—H10B 109.5
N2—P1—Se1 112.32 (7) C9—C10—H10C 109.5
N4—P2—N1 113.00 (10) H10A—C10—H10C 109.5
N4—P2—N2 111.62 (10) H10B—C10—H10C 109.5
N1—P2—N2 83.89 (9) C9—C11—H11A 109.5
N4—P2—Se2 117.13 (7) C9—C11—H11B 109.5
N1—P2—Se2 112.12 (7) H11A—C11—H11B 109.5
N2—P2—Se2 114.56 (7) C9—C11—H11C 109.5
C1—N1—P1 131.96 (15) H11A—C11—H11C 109.5
C1—N1—P2 131.96 (15) H11B—C11—H11C 109.5
P1—N1—P2 93.88 (9) C9—C12—H12A 109.5
C5—N2—P1 131.49 (14) C9—C12—H12B 109.5
C5—N2—P2 131.07 (14) H12A—C12—H12B 109.5
P1—N2—P2 93.38 (9) C9—C12—H12C 109.5
C9—N3—P1 134.04 (15) H12A—C12—H12C 109.5
C9—N3—H3 115.7 H12B—C12—H12C 109.5
P1—N3—H3 110.3 C14A—C13—C15A 117.7 (5)
C13—N4—P2 137.71 (17) C16—C13—N4 116.3 (3)
C13—N4—H4 112.1 C14A—C13—N4 110.1 (3)
P2—N4—H4 110.2 C15A—C13—N4 110.5 (3)
N1—C1—C2 110.0 (2) C16—C13—C14 116.9 (4)
N1—C1—C4 108.4 (2) N4—C13—C14 105.1 (3)
C2—C1—C4 109.7 (2) C16—C13—C15 110.2 (4)
N1—C1—C3 107.8 (2) N4—C13—C15 105.9 (3)
C2—C1—C3 111.3 (2) C14—C13—C15 100.8 (4)
C4—C1—C3 109.5 (2) C14A—C13—C16A 107.5 (5)
C1—C2—H2A 109.5 C15A—C13—C16A 102.7 (4)
C1—C2—H2B 109.5 N4—C13—C16A 107.5 (3)
H2A—C2—H2B 109.5 C13—C14—H14A 109.5
C1—C2—H2C 109.5 C13—C14—H14B 109.5
H2A—C2—H2C 109.5 H14A—C14—H14B 109.5
H2B—C2—H2C 109.5 C13—C14—H14C 109.5
C1—C3—H3A 109.5 H14A—C14—H14C 109.5
C1—C3—H3B 109.5 H14B—C14—H14C 109.5
H3A—C3—H3B 109.5 C13—C15—H15A 109.5
C1—C3—H3C 109.5 C13—C15—H15B 109.5
H3A—C3—H3C 109.5 H15A—C15—H15B 109.5
H3B—C3—H3C 109.5 C13—C15—H15C 109.5
C1—C4—H4A 109.5 H15A—C15—H15C 109.5
C1—C4—H4B 109.5 H15B—C15—H15C 109.5
H4A—C4—H4B 109.5 C13—C16—H16A 109.5
C1—C4—H4C 109.5 C13—C16—H16B 109.5
H4A—C4—H4C 109.5 H16A—C16—H16B 109.5
H4B—C4—H4C 109.5 C13—C16—H16C 109.5
N2—C5—C7 112.62 (19) H16A—C16—H16C 109.5
N2—C5—C6 107.7 (2) H16B—C16—H16C 109.5
C7—C5—C6 110.1 (2) C13—C14A—H14D 109.5
N2—C5—C8 106.93 (18) C13—C14A—H14E 109.5
C7—C5—C8 110.7 (2) H14D—C14A—H14E 109.5
C6—C5—C8 108.7 (2) C13—C14A—H14F 109.5
C5—C6—H6A 109.5 H14D—C14A—H14F 109.5
C5—C6—H6B 109.5 H14E—C14A—H14F 109.5
H6A—C6—H6B 109.5 C13—C15A—H15D 109.5
C5—C6—H6C 109.5 C13—C15A—H15E 109.5
H6A—C6—H6C 109.5 H15D—C15A—H15E 109.5
H6B—C6—H6C 109.5 C13—C15A—H15F 109.5
C5—C7—H7A 109.5 H15D—C15A—H15F 109.5
C5—C7—H7B 109.5 H15E—C15A—H15F 109.5
H7A—C7—H7B 109.5 C13—C16A—H16D 109.5
C5—C7—H7C 109.5 C13—C16A—H16E 109.5
H7A—C7—H7C 109.5 H16D—C16A—H16E 109.5
H7B—C7—H7C 109.5 C13—C16A—H16F 109.5
C5—C8—H8A 109.5 H16D—C16A—H16F 109.5
C5—C8—H8B 109.5 H16E—C16A—H16F 109.5
N3—P1—N1—C1 64.6 (2) Se1—P1—N3—C9 9.1 (3)
N2—P1—N1—C1 179.1 (2) N1—P2—N4—C13 131.3 (3)
Se1—P1—N1—C1 −69.0 (2) N2—P2—N4—C13 −136.2 (3)
N3—P1—N1—P2 −131.16 (9) Se2—P2—N4—C13 −1.3 (3)
N2—P1—N1—P2 −16.68 (9) P1—N1—C1—C2 51.1 (3)
Se1—P1—N1—P2 95.18 (7) P2—N1—C1—C2 −107.5 (3)
N4—P2—N1—C1 −68.2 (2) P1—N1—C1—C4 171.10 (18)
N2—P2—N1—C1 −179.1 (2) P2—N1—C1—C4 12.5 (3)
Se2—P2—N1—C1 66.8 (2) P1—N1—C1—C3 −70.4 (3)
N4—P2—N1—P1 127.60 (10) P2—N1—C1—C3 131.0 (2)
N2—P2—N1—P1 16.68 (9) P1—N2—C5—C7 −74.2 (3)
Se2—P2—N1—P1 −97.38 (7) P2—N2—C5—C7 76.9 (3)
N3—P1—N2—C5 −72.6 (2) P1—N2—C5—C6 164.2 (2)
N1—P1—N2—C5 175.2 (2) P2—N2—C5—C6 −44.7 (3)
Se1—P1—N2—C5 60.3 (2) P1—N2—C5—C8 47.6 (3)
N3—P1—N2—P2 128.84 (10) P2—N2—C5—C8 −161.39 (17)
N1—P1—N2—P2 16.61 (9) P1—N3—C9—C12 −63.8 (3)
Se1—P1—N2—P2 −98.24 (7) P1—N3—C9—C10 59.6 (3)
N4—P2—N2—C5 72.4 (2) P1—N3—C9—C11 177.9 (2)
N1—P2—N2—C5 −175.3 (2) P2—N4—C13—C16 −8.1 (5)
Se2—P2—N2—C5 −63.7 (2) P2—N4—C13—C14A −179.4 (4)
N4—P2—N2—P1 −128.94 (10) P2—N4—C13—C15A 48.9 (5)
N1—P2—N2—P1 −16.59 (9) P2—N4—C13—C14 −139.3 (4)
Se2—P2—N2—P1 94.97 (7) P2—N4—C13—C15 114.6 (4)
N1—P1—N3—C9 −125.0 (2) P2—N4—C13—C16A −62.5 (4)
N2—P1—N3—C9 141.1 (2)

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
N4—H4···Cl1i 0.91 2.45 3.317 (2) 159
N3—H3···Cl1i 0.91 2.57 3.4160 (19) 155
C16—H16A···Cl2ii 0.98 2.82 3.746 (5) 157
C14A—H14E···Cl2ii 0.98 2.82 3.742 (7) 157

Symmetry codes: (i) x−1/2, y, −z+1/2; (ii) x−1/2, −y+1/2, −z+1.

Funding Statement

This work was funded by Welch Foundation grant V-0004. Tulane University grant .

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S2056989018000841/nk2239sup1.cif

e-74-00180-sup1.cif (2.8MB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018000841/nk2239Isup2.hkl

e-74-00180-Isup2.hkl (565.4KB, hkl)

CCDC reference: 1549758

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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