Table 2.
Association with magnesiuma | Association with CADa | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
SNP | Closest gene | Chr | EAb | EAFc | % variance explained | F-statistic | Beta (mmol/L) | SE | P | Betad | SE | P |
rs4072037 | MUC1 | 1 | T | 0.54 | 0.57 | 136 | 0.010 | 0.001 | 2.0 × 10−36 | −0.015 | 0.010 | 0.11 |
rs7965584e | ATP2B1 | 12 | A | 0.71 | 0.25 | 60 | 0.007 | 0.001 | 1.1 × 10−16 | −0.016 | 0.011 | 0.13 |
rs3925584 | DCDC5 | 11 | T | 0.55 | 0.25 | 60 | 0.006 | 0.001 | 5.2 × 10−16 | −0.016 | 0.010 | 0.09 |
rs11144134 | TRPM6 | 9 | C | 0.08 | 0.23 | 55 | 0.011 | 0.001 | 8.2 × 10−15 | 0.039 | 0.019 | 0.04 |
rs13146355 | SHROOM3 | 4 | A | 0.44 | 0.19 | 45 | 0.005 | 0.001 | 6.3 × 10−13 | −0.003 | 0.010 | 0.76 |
rs448378 | MDS1 | 3 | A | 0.53 | 0.13 | 30 | 0.004 | 0.001 | 1.3 × 10−8 | −0.017 | 0.009 | 0.06 |
CAD coronary artery disease, Chr chromosome, EA effect allele, EAF effect allele frequency, SE standard error, SNP single-nucleotide polymorphism
aBeta coefficients and standard errors were obtained from genome-wide association studies on serum magnesium (23,829 individuals) [22] and CAD (60,801 cases and 123,504 non-cases) [23]
bAllele associated with higher serum magnesium levels
cFrequency of the magnesium-raising allele in the magnesium genome-wide association study [22]
dLog odds ratio of CAD for each additional magnesium-increasing allele
eProxy (rs10858938; r2 = 0.96 in European descent individuals) was used in the CAD data