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. Author manuscript; available in PMC: 2019 Apr 5.
Published in final edited form as: Cell. 2018 Apr 5;173(2):291–304.e6. doi: 10.1016/j.cell.2018.03.022

Figure 5. Sample Characteristics in the Context of the iCluster TumorMap.

Figure 5

(A–D) The TumorMap layout is as described for Figure 4.

(A) Histopathology. Colors indicate major histopathology types. Adenocarcinoma, yellow; squamous cell carcinoma, purple; other carcinomas, green; sarcomas, light blue; leukemias, dark blue; lymphomas, magenta; and other, red.

(B) Immune subtypes. Wound-healing group, red; IFN-gamma, yellow; inflammatory group, green; lymphocyte-depleted, light blue; immunologically quiescent, dark blue; and transforming growth factor (TGF)-beta activity, magenta.

(C and D) Stemness signatures for (C) mRNA and (D) DNA methylation from Malta et al. (2018) are displayed. Increasing red colors indicate increasing stemness index.