Table 1.
Data collection and refinement statistics.
| TTTA | TCTA | TCCA | CCCA | |
|---|---|---|---|---|
| Data collection | ||||
| Beamline | SLS | SPring-8 | SPring-8 | SLS |
| PXI | BL41XU | BL41XU | PXI | |
| Wavelength (Å) | 1.0000 | 1.0000 | 1.0000 | 1.0000 |
| Space group | P41212 | P41212 | P41212 | P212121 |
| Cell dimensions | ||||
| a, b, c (Å) | 103.2, 103.2, 363.9 | 102.5, 102.5, 373.9 | 102.0, 102.0, 372.5 | 102.0, 103.5, 342.7 |
| α, β, γ (°) | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 | 90, 90, 90 |
| Resolution (Å)* | 49.6–2.5 (2.56–2.50) |
49.4–2.4 (2.45–2.40) |
49.2–2.5 (2.56–2.50) |
49.9–2.4 (2.44–2.40) |
| Rpim | 0.033 (0.436) | 0.014 (0.339) | 0.024 (0.518) | 0.043 (0.162) |
| I/σI | 12.7 (1.6) | 25.0 (2.1) | 15.6 (1.6) | 9.2 (2.8) |
| Completeness (%) | 99.9 (100) | 96.3 (97.8) | 99.8 (100) | 97.3 (82.8) |
| Multiplicity | 12.6 (12.7) | 8.9 (7.0) | 8.6 (9.0) | 4.0 (3.4) |
| CC(1/2) | 0.997 (0.677) | 0.999 (0.700) | 0.998 (0.543) | 0.993 (0.889) |
| Refinement | ||||
| Resolution (Å) | 49.7–2.5 (2.53–2.50) |
49.4–2.4 (2.43–2.40) |
49.2–2.5 (2.53–2.50) |
49.9–2.4 (2.43–2.40) |
| No. reflections | 69,046 (2,583) |
75,435 (2,649) |
69,014 (2,617) |
138,080 (3,632) |
| Rwork/Rfree | 0.178/0.228 (0.289/0.394) |
0.193/0.238 (0.307/0.383) |
0.193/0.244 (0.340/0.383) |
0.178/0.230 (0.215/0.277) |
| No. atoms | ||||
| Protein | 9,776 | 9,794 | 9,749 | 19,707 |
| Nucleic acid | 1,618 | 1,618 | 1,618 | 3,236 |
| Ion | 5 | 2 | 2 | 5 |
| Solvent | 143 | 53 | 27 | 471 |
| B-factors (Å2) | ||||
| Protein | 83.4 | 81.6 | 88.8 | 60.4 |
| Nucleic acid | 71.3 | 76.4 | 83.5 | 52.0 |
| Ion | 75.7 | 77.9 | 79.2 | 37.2 |
| Solvent | 66.8 | 60.1 | 68.8 | 46.2 |
| R.m.s. deviations | ||||
| Bond lengths (Å) | 0.007 | 0.007 | 0.007 | 0.007 |
| Bond angles (°) | 0.913 | 0.904 | 0.924 | 0.893 |
| Ramachandran plot (%) | ||||
| Favored region | 96.83 | 95.62 | 95.94 | 96.60 |
| Allowed region | 3.01 | 3.96 | 3.89 | 3.15 |
| Outlier region | 0.17 | 0.41 | 0.17 | 0.25 |
Values in parentheses are for the highest resolution shell.