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. 2018 May 14;12:1239–1254. doi: 10.2147/DDDT.S159767

Table 2.

A brief list of available computational resources employed in the peptide design

Resource Description References
TumorHoPe Tumor-homing peptide database Kapoor et al144
Brainpep Blood–brain barrier peptide database Volpe145
SARvision Peptide bioinformatics Hansen et al75
PEP-FOLD Peptide structure prediction Thevenet et al81
PepX Unique protein–peptide structural clusters Vanhee et al146
PepBind PDB-derived protein–peptide structures Das et al89
PeptiDB Survey of protein–peptide interactions London et al90
FlexPepDock Protein–peptide docking London et al147
AnchorDock Protein–peptide docking Ben-Shimon and Niv104
HADDOCK Protein–peptide docking Trellet et al105
CABS-dock Protein–peptide docking Kurcinski et al106
GalaxyPepDock Protein–peptide docking Lee et al107
DocScheme Protein–peptide docking Niv and Weinstein98
DynaDock Protein–peptide docking Antes99
Pepspec Protein–peptide docking King and Bradley100
PepCrawler Protein–peptide docking Donsky and Wolfson101
pDOCK Protein–peptide docking Khan and Ranganathan148
ACCLUSTER Peptide-binding site prediction Yan and Zou149
ACCLUSTER+BriX Peptide-binding site prediction Verschueren et al150
PEP-SiteFinder Peptide-binding site prediction Saladin et al151
VitAL De novo peptide design Unal et al152

Abbreviation: PDB, Protein Data Bank.