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. 2018 May 16;6:e4704. doi: 10.7717/peerj.4704

Table 3. Potential key pathways selected out from KEGG pathway enrichment analysis of DEGs.

Category Term Count P Value Genes
Up-regulated Cytokine-cytokine receptor interaction 32 4.04E−06 CSF2, IL1R2, TNFRSF21, TNF, CCL2, CCR1, CXCL8, IL15, IL7R, CCL4, IL17RA, CXCL10, TNFRSF11B, CXCR4, IFNG, IL1B, FAS, XCR1, LTB, IFNGR2, IL1A, IL4, IL18R1, IL6, TNFSF4, LTBR, TGFBR1, LOC100348776, CCR8, TNFSF10, TNFSF13B, CCR2
TNF signaling pathway 19 1.11E−05 PIK3CG, CSF2, IL18R1, IL6, CCL2, TNF, MMP9, CREB1, IL15, MMP3, BIRC3, CXCL10, VCAM1, NOD2, MAPK14, IL1B, CREB3L1, FAS, TRAF3
Cell cycle 19 3.93E−04 CDC6, CDK1, TTK, CHEK1, RB1, MCM4, YWHAE, MCM6, CCNE2, CCNE1, YWHAG, CCNB2, MCM7, MAD2L1, PCNA, BUB1B, ORC6, CCNA2, BUB3
Toll-like receptor signaling pathway 15 5.71E−04 PIK3CG, IL6, TNF, LY96, TLR2, LOC100348776, CXCL8, TLR4, CCL4, CXCL10, IKBKE, CD80, MAPK14, IL1B, TRAF3
DNA replication 8 0.002306 POLD3, MCM7, SSBP1, POLE, PCNA, MCM4, RPA3, MCM6
Chemokine signaling pathway 19 0.007327 PIK3CG, LOC100008716, CCL2, VAV3, NCF1, HCK, CCR1, STAT5B, CXCL8, LOC100348776, CCL4, CXCL10, CCR8, CXCR4, CCR2, GNB4, XCR1, PLCB2, LOC100349255
Cell adhesion molecules (CAMs) 16 0.017244 CADM1, SELL, NECTIN1, LOC100351865, VCAM1, ALCAM, CD80, RLA-DRB1, ICOS, ITGB7, CD274, LOC100350168, CD2, VCAN, LOC100343144, CD226
Down-regulated cGMP-PKG signaling pathway 16 0.003361 ROCK1, GNAI1, MYLK3, MRVI1, ATP1A2, PRKG1, MYL9, AGTR1, EDNRB, KCNJ8, PLN, PDE5A, GUCY1A2, GUCY1B3, MYLK, PIK3R1
TGF-beta signaling pathway 11 0.003933 BMP4, BMP2, LTBP1, ROCK1, ZFYVE9, LOC100008826, BMPR1B, MYC, BMP5, TGFB2, ACVR1C
MAPK signaling pathway 20 0.004435 EGFR, FGFR1, MRAS, CACNB1, DUSP10, CACNB2, FGF10, CACNB3, FGF12, MECOM, TGFB2, MAP3K6, FOS, RASGRP3, DUSP1, MAP3K1, MYC, FGF2, GADD45A, CACNA1A
Renin-angiotensin system 5 0.00852 AGTR1, AGTR2, ACE, ACE2, MME
Vascular smooth muscle contraction 12 0.012552 AGTR1, ACTG2, ROCK1, MYLK3, CALD1, MRVI1, GUCY1A2, GUCY1B3, PRKG1, PLA2G2D, MYLK, MYL9
Focal adhesion 16 0.01614 EGFR, CAV2, COL4A2, ROCK1, MYLK3, ITGA2, CAPN2, COL4A5, MYL9, VEGFC, ITGA6, ITGB8, PIK3R1, MYLK, THBS3, SHC4
PI3K-Akt signaling pathway 22 0.016374 EGFR, FGFR1, COL4A2, RBL2, EFNA1, ITGA2, FGF10, FGF12, COL4A5, VEGFC, ITGA6, PRLR, ITGB8, EPOR, MTCP1, PPP2R2B, MYC, ANGPT2, FGF2, PIK3R1, THBS3, GHR