TABLE 5.
Blind testing at the Institute of Veterinary Bacteriology (Bern, Switzerland)
Strain | Sample type | Speciesa | RPA resultb |
Identification | ||
---|---|---|---|---|---|---|
BA_5345 | lef (pXO1) | capA (pXO2) | ||||
JF3788 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3786 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3852 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3787 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3785 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3784 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3853 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3854 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3783 | DNA extract | B. anthracis | + | + | + | B. anthracis |
JF3960 | Lysate | B. anthracis | + | + | + | B. anthracis |
JF3965 | Lysate | B. anthracis | + | + | + | B. anthracis |
JF3966 | Lysate | B. anthracis | + | + | + | B. anthracis |
JF3963 | Lysate | B. anthracis | + | + | + | B. anthracis |
JF3961 | Lysate | B. anthracis | + | + | + | B. anthracis |
Chad A1 | Lysate | B. anthracis | + | + | + | B. anthracis |
Chad A3 | Lysate | B. anthracis | + | + | + | B. anthracis |
Chad A5 | Lysate | B. anthracis | + | + | + | B. anthracis |
Chad A7 | Lysate | B. anthracis | + | + | + | B. anthracis |
Chad A10 | Lysate | B. anthracis | + | + | + | B. anthracis |
Chad A12 | Lysate | B. anthracis | + | + | + | B. anthracis |
JF4875c | DNA extract | B. cereus | − | − | − | B. cereus |
JF5512c | DNA extract | B. cereus | − | − | − | B. cereus |
JF4075c | DNA extract | B. cereus | − | − | − | B. cereus |
M2841c | DNA extract | B. cereus | − | − | − | B. cereus |
JF5881c | DNA extract | B. cereus | − | − | − | B. cereus |
JF3778c | DNA extract | B. cereus | − | − | − | B. cereus |
JF1887c | DNA extract | B. cereus | − | − | − | B. cereus |
M2089c | DNA extract | B. cereus | − | − | − | B. cereus |
JF4090c | DNA extract | B. cereus | − | − | − | B. cereus |
JF4059c | DNA extract | B. cereus | − | − | − | B. cereus |
Genomic DNA was characterized by real-time PCR TaqMan assays targeting sap (chromosomal), cap (pXO2), and pag (pXO1) genes.
−, not detected; +, detected.
Endpoint PCR of the panC gene confirmed the presence of amplifiable DNA in all negative samples (B. cereus group).