Table 1:
Statistics of SNPs in different genome regions of wild and domesticated quails’ subpopulations
| Region | Subpopulation | Autosomes | Chromosome Z | ||||||
|---|---|---|---|---|---|---|---|---|---|
| # of SNPs | π (10-3) | θ w (10-3) | Tajima's D | # of SNPs | π (10-3) | θ w (10-3) | Tajima's D | ||
| Exona | Wild | 520,747 | 7.324 | 8.979 | −0.502 | 13,963 | 5.191 | 5.940 | −0.309 |
| Egg-type | 320,629 | 7.206 | 6.449 | 0.256 | 7201 | 5.448 | 4.479 | 0.425 | |
| Meat-type | 282,019 | 7.152 | 6.238 | 0.331 | 6967 | 5.120 | 4.549 | 0.275 | |
| Introna | Wild | 13,632,632 | 11.868 | 14.302 | −0.548 | 555,643 | 8.100 | 9.197 | −0.354 |
| Egg-type | 8468,826 | 10.735 | 9.668 | 0.270 | 285,930 | 7.934 | 6.483 | 0.489 | |
| Meat-type | 7418,909 | 10.167 | 9.005 | 0.299 | 278,361 | 8.546 | 7.482 | 0.365 | |
| All regionsa | Wild | 33,744,246 | 8.679 | 10.709 | −0.763 | 1438,213 | 5.813 | 6.683 | −0.628 |
| Egg-type | 20,848,043 | 7.338 | 6.617 | 0.467 | 749,670 | 4.031 | 3.389 | 0.666 | |
| Meat-type | 18,250,531 | 6.901 | 6.052 | 0.600 | 716,433 | 3.843 | 3.328 | 0.593 | |
a
All regions refers to the total genome regions; exon and intron refer to exon and intron regions, respectively.