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. 2018 May 21;149(7):072311. doi: 10.1063/1.5027439

TABLE III.

Differences in first-order contributions to the configurational binding entropy, for ligands only (−TΔΔSij,bind), for binding site residues only (−TΔSB,ij), and for ligand and binding site combined (Sum). Results are computed with the combined (concatenated) parallel runs for each system (Runs A and B), and are presented as free energy contributions, in kcal/mol.

TΔΔSij,bind TΔSB,ij Sum
cV–fV 1.62 5.50 7.12
cQ–fQ 3.29 5.01 8.30
fQ–fV −1.64 −0.25 −1.89
cQ–cV 0.03 −0.75 −0.71