Table 1.
Metadata for the 33 SAGs and genomes from ref. [27]
| Genome name | Genome OID in IMG/MER | Phylum/Class | Tribe | Lake | Collection date (M/D/Y) | Assembly size (Mb) | Est. genome comp. (checkm) | Number of contigs | GC content (%) | Citation |
|---|---|---|---|---|---|---|---|---|---|---|
| AAA278-O22 | 2236661007 | Actinobacteria | acI-A1 | Damariscotta | 09/18/09 | 1.14 | 74.4 | 43 | 47.6 | Ghylin et al. [30] |
| AAA027-M14 | 2236661003 | Actinobacteria | acI-A1 | Mendota | 12/5/2009 | 0.82 | 43.1 | 22 | 47.3 | Ghylin et al. [30] |
| IMCC25003 | 2602042019 | Actinobacteria | acI-A1 | Soyang | Jun-13 | 1.35 | NA | 1 | 49.1 | Kang et al. [27] |
| IMCC26103 | 2602042020 | Actinobacteria | acI-A4 | Soyang | Apr-14 | 1.46 | NA | 1 | 47.0 | Kang et al. [27] |
| AAA028-I14 | 2619618809 | Actinobacteria | acI-A6 | Mendota | 12/5/2009 | 0.78 | 39.66 | 54 | 45.2 | This paper |
| AAA044-N04 | 2236661005 | Actinobacteria | acI-A7 | Damariscotta | 04/28/09 | 1.29 | 79.59 | 23 | 45.6 | Ghylin et al. [30] |
| AAA041-L13 | 2519899769 | Actinobacteria | acI-A7 | Damariscotta | 04/28/09 | 1.38 | 74.14 | 103 | 44.2 | This paper |
| AAA024-D14 | 2264265190 | Actinobacteria | acI-A7 | Sparkling | 05/28/09 | 0.78 | 48.4 | 82 | 45.4 | Ghylin et al. [30] |
| AAA023-J06 | 2236661001 | Actinobacteria | acI-A7 | Sparkling | 05/28/09 | 0.70 | 34.48 | 98 | 45.1 | Ghylin et al. [30] |
| IMCC19121 | 2602042021 | Actinobacteria | acI-A7 | Soyang | Oct-11 | 1.51 | NA | 1 | 45.5 | Kang et al. [27] |
| AB141-P03 | 2236876028 | Actinobacteria | acI-B1 | Stechlin | 05/25/10 | 0.66 | 45.98 | 66 | 40.8 | Ghylin et al. [30] |
| AAA278-I18 | 2236661006 | Actinobacteria | acI-B1 | Damariscotta | 09/18/09 | 0.94 | 63.73 | 54 | 41.4 | Ghylin et al. [30] |
| AAA028-A23 | 2236661004 | Actinobacteria | acI-B1 | Mendota | 12/5/2009 | 0.83 | 57.56 | 64 | 41.5 | Ghylin et al. [30] |
| AAA027-L06 | 2505679121 | Actinobacteria | acI-B1 | Mendota | 12/5/2009 | 1.16 | 76.59 | 75 | 41.7 | Garcia et al. [29] |
| AAA027-J17 | 2236661002 | Actinobacteria | acI-B1 | Mendota | 12/5/2009 | 0.97 | 65.26 | 81 | 42.1 | Ghylin et al. [30] |
| AAA023-D18 | 2236661009 | Actinobacteria | acI-B1 | Sparkling | 05/28/09 | 0.75 | 44.22 | 67 | 39.6 | Ghylin et al. [30] |
| AAA044-D11 | 2619618811 | Actinobacteria | acI-B4 | Damariscotta | 04/28/09 | 1.15 | 66.18 | 30 | 44.2 | This paper |
| IMCC26077 | 2606217181 | Actinobacteria | acI-C1 | Soyang | Apr-14 | 1.55 | NA | 1 | 51.3 | Kang et al. [27] |
| AAA027-D23 | 2524023172 | Actinobacteria | acSTL-A1 | Mendota | 12/5/2009 | 0.94 | 44.01 | 18 | 48.0 | This paper |
| AAA028-N15 | 2619618810 | Actinobacteria | acTH1-A1 | Mendota | 12/5/2009 | 0.83 | 45.98 | 19 | 38.0 | This paper |
| AAA487-M09 | 2236347068 | Alphaproteobacteria | LD12 | Damariscotta | 09/18/09 | 0.63 | 53.15 | 97 | 29.1 | Zaremba-Niedzwiedzka et al. [31] |
| AAA280-P20 | 2236876029 | Alphaproteobacteria | LD12 | Damariscotta | 09/18/09 | 0.72 | 65.06 | 65 | 29.6 | Zaremba-Niedzwiedzka et al. [31] |
| AAA280-B11 | 2236876032 | Alphaproteobacteria | LD12 | Damariscotta | 09/18/09 | 0.67 | 51.24 | 47 | 29.8 | Zaremba-Niedzwiedzka et al. [31] |
| AAA028-D10 | 2236347069 | Alphaproteobacteria | LD12 | Mendota | 12/5/2009 | 0.93 | 81.64 | 57 | 29.6 | Zaremba-Niedzwiedzka et al. [31] |
| AAA028-C07 | 2236661008 | Alphaproteobacteria | LD12 | Mendota | 12/5/2009 | 0.85 | 74.12 | 32 | 29.5 | Zaremba-Niedzwiedzka et al. [31] |
| AAA027-L15 | 2236876031 | Alphaproteobacteria | LD12 | Mendota | 12/5/2009 | 0.72 | 68.68 | 56 | 29.4 | Zaremba-Niedzwiedzka et al. [31] |
| AAA027-J10 | 2236876030 | Alphaproteobacteria | LD12 | Mendota | 12/5/2009 | 0.79 | 69.56 | 82 | 29.8 | Zaremba-Niedzwiedzka et al. [31] |
| AAA027-C06 | 2264265094 | Alphaproteobacteria | LD12 | Mendota | 12/5/2009 | 0.78 | 82.29 | 90 | 29.6 | Zaremba-Niedzwiedzka et al. [31] |
| AAA024-N17 | 2236876027 | Alphaproteobacteria | LD12 | Sparkling | 05/28/09 | 0.33 | 30.19 | 45 | 30.1 | Zaremba-Niedzwiedzka et al. [31] |
| AAA023-L09 | 2236661000 | Alphaproteobacteria | LD12 | Sparkling | 05/28/09 | 0.77 | 68.1 | 76 | 29.4 | Zaremba-Niedzwiedzka et al. [31] |
| AAA027-G08 | 2619618806 | Bacteroidetes | bacI-A1 | Mendota | 12/5/2009 | 1.32 | 59.36 | 36 | 35.5 | This paper |
| AAA027-N21 | 2619618807 | Bacteroidetes | Flavo-A2 | Mendota | 12/5/2009 | 2.21 | 92.44 | 36 | 33.1 | This paper |
| AAA027-K21 | 2619618803 | Betaproteobacteria | betIII-A1 | Mendota | 12/5/2009 | 1.38 | 42.1 | 21 | 51.5 | This paper |
| AAA028-K02 | 2619618804 | Betaproteobacteria | LD28 | Mendota | 12/5/2009 | 0.56 | 34.48 | 8 | 37.5 | This paper |
| AAA027-I06 | 2619618802 | Betaproteobacteria | Lhab-A1 | Mendota | 12/5/2009 | 1.52 | 39.38 | 79 | 50.9 | This paper |
| AAA027-C02 | 2619618801 | Betaproteobacteria | PnecC | Mendota | 12/5/2009 | 1.27 | 61.93 | 49 | 43.7 | This paper |
| AAA027-I19 | 2619618805 | Verrucomicrobia | Opiputaceae | Mendota | 12/5/2009 | 2.42 | 54.58 | 63 | 51.7 | This paper |
The Genome OID is the object identifier for the genome record in the Joint Genome Institute’s IMG/MER Database. Estimated genome completeness was calculated using CheckM as described in the main text and [42]
NA not applicable