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. 2018 May 21;18:29. doi: 10.1186/s12911-018-0609-7

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 1 — Representation model for information extraction of biomarker. a Reporting system for multi biopsy samples from a patient. As same biomarker test can be conducted for tissue slide #1 and tissue slide #2 of the patient, a IHC report can contain multiple “slide paragraph (TS_P)”. Also, multiple pathologic findings derived from multiple IHC tests can be reported in one SP report b) or in separate SP reports. c Representation model for information extraction of biomarker from pathology reports in Seoul National University Hospital. IHC:immunohistochemistry, SP:surgical pathologic, BN:biomarker name