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. 2018 May 21;18:29. doi: 10.1186/s12911-018-0609-7

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© The Author(s). 2018

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 2 — Flow chart of information extraction from IHC report with an example. Step #1) Classify type of IHC report and choose appropriate parser for the input. Step #2) Normalize biomarker names recognized from step #1 using BN dictionary. Step #3) Normalize test results recognized from step #1 using TR dictionary. BN: biomarker name, TR: test result