Table 9.
Stages of psoriasis | Gene | CDS mutation | AA mutation | MUpro | I-Mutant 2.0 | ||||
---|---|---|---|---|---|---|---|---|---|
SVM | SVMCS | NN | NNCS | Stability | DDG | ||||
Mild | K14 | c.372C > A | p.D124E | Increase | 0.05 | Increase | 0.71 | Decrease | − 0.52 |
c.479A > T | p.K160I | Decrease | − 0.54 | Decrease | − 0.89 | Decrease | 0.61 | ||
c.659G > T | p.G220V | Increase | 0.41 | Increase | 0.65 | Decrease | − 0.46 | ||
c.896G > C | p.R299P | Decrease | − 0.57 | Decrease | − 0.75 | Decrease | − 2.22 | ||
c.944G > C | p.R315P | Decrease | − 0.53 | Decrease | − 0.86 | Decrease | − 1.26 | ||
c.1246C > T | p.R416C | Decrease | − 0.16 | Decrease | − 0.58 | Decrease | − 0.3 | ||
K10 | c.502G > C | p.E168Q | Increase | 0.39 | Increase | 0.70 | Decrease | − 0.01 | |
c.679G > T | p.A227S | Decrease | − 1 | Decrease | − 0.71 | Decrease | − 0.19 | ||
c.715G > C | p.E239Q | Decrease | − 0.12 | Decrease | − 0.64 | Decrease | − 0.28 | ||
c.730C > G | p.L244V | Decrease | − 1 | Decrease | − 0.94 | Decrease | − 2.03 | ||
c.770G > T | p.R257M | Increase | 0.53 | Increase | 0.81 | Decrease | − 0.47 | ||
Moderate | K14 | c.388C > G | p.L130V | Decrease | − 1 | Decrease | − 1 | Decrease | − 1.67 |
c.415G > C | p.A139P | Decrease | − 0.63 | Decrease | − 0.88 | Decrease | − 1.89 | ||
c.419A > T | p.N140I | Decrease | − 0.23 | Decrease | − 0.67 | Increase | 1.57 | ||
c.442C > T | p.R148C | Decrease | − 1 | Decrease | − 1 | Decrease | − 0.28 | ||
c.512A > T | p.D171V | Decrease | − 0.37 | Decrease | − 1 | Decrease | − 0.36 | ||
c.519G > T | p.R173S | Decrease | − 1 | Decrease | − 1 | Decrease | − 2.37 | ||
c.904G > C | p.A302P | Increase | 0.63 | Increase | 0.73 | Decrease | − 3.34 | ||
c.1057G > C | p.A353P | Decrease | − 0.58 | Decrease | − 0.65 | Increase | − 0.65 | ||
c.1234A > T | P.I412F | Decrease | − 1 | Decrease | − 0.69 | Decrease | − 0.95 | ||
K10 | c.479A > C | p.Y160S | Decrease | − 0.47 | Decrease | − 0.64 | Decrease | − 1.16 | |
c.520C > A | p.L174M | Decrease | − 1 | Decrease | − 1 | Decrease | 0.12 | ||
c.674A > C | p.D225A | Decrease | − 0.39 | Decrease | − 0.78 | Decrease | − 0.76 | ||
c.704G > T | p.R235M | Decrease | − 0.45 | Decrease | − 0.89 | Decrease | − 0.59 | ||
c.711G > T | p.K237N | Decrease | − 0.60 | Decrease | − 1 | Increase | 0.26 | ||
c.785T > A | p.L262Q | Decrease | − 1 | Decrease | − 1 | Decrease | − 1.82 | ||
K16 | c.667C > G | p.L223V | Decrease | − 1 | Decrease | − 1 | Decrease | − 1.39 | |
K17 | c.503A > T | p.D168V | Decrease | − 0.30 | Decrease | − 0.60 | Decrease | − 0.73 | |
c.662A > T | p.N221I | Decrease | − 0.70 | Increase | 0.62 | Increase | 1.64 | ||
c.682G > C | p.A228P | Decrease | − 0.04 | Increase | 0.61 | Decrease | − 2.48 | ||
c.907C > T | p.L303F | Decrease | − 1 | Decrease | − 1 | Decrease | 0.95 | ||
c.986C > T | p.A329V | Decrease | − 0.34 | Decrease | − 0.88 | Decrease | 0.12 | ||
c.1070G > T | p.R357L | Increase | 0.15 | Increase | 0.68 | Increase | 0.66 |
CDS coding sequences, AA amino acid, SVM support vector machine, SVMCS SVM confidence score, NN neural network, NNCS neural network confidence score, DDG free energy change value