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. 2018 May 8;9(35):24014–24027. doi: 10.18632/oncotarget.25265

Table 1. Selected cases for WES and WTS analysis: demographic characteristics of the patient population at the time of diagnosis, and molecular characterization of the glioblastoma tumors.

RFS
Month
RFS
ID
ID
Sample
Age Sex Tumor Size
(cm2)
Brain
Region
EGFR EGFRvIII MGMT IDH1/2 RNAseq
(WTS)
Exome
Seq (WES)
2 S A 58 F 70 Frontal AMPL Trunc. MET WT X X
3 S B 60 F 52 Parietal Not AMPL WT UNMET WT X X
3 S C 58 F 33 Right-
temporal
AMPL WT MET WT X X
5 S D 62 M 7 Right-insula Not AMPL WT UNMET WT X
5 S E 70 M 28 Left-prerolandic
(frontal)
Not AMPL WT MET WT X X
5 S F 58 F 146 Right
frontal
Not AMPL WT UNMET WT X
16 M G 58 M 90 ND AMPL WT MET WT X
18 M H 56 M 13 ND Not AMPL WT UNMET WT X
23 M I 60 F 48 Basal
temporal lobe
AMPL Trunc. MET WT X
25 L J 61 M 17 ND Not AMPL WT UNMET WT X X
30 L K 57 F 33 Frontal AMPL WT MET WT X X
32 L L 44 F 3 Frontal AMPL Trunc. MET WT X X
42 L M 50 F 16 ND ND WT UNMET WT X X

RFS, recurrence-free survival; S, short group; M, medium group; L, long group; letters from A to M represents each ID samples; WES, whole exome sequencing; WTS, whole transcriptome sequencing; EGFR, epidermal growth factor receptor; EGFRvIII, EGFR variant III; MGMT, O(6)methylguanine-DNA methyltransferase; IDH1, isocitrate dehydrogenase1; MET, methylation; UNMET, no methylation; Trunc, presence of truncated form; AMPL, amplified; WT, wildtype; ND, not determined.