Table 3.
List of all BD DEGs that were targeted by selected miRNAs modulated in BD and their respective targeting miRNAs.
| DEGs | MicroRNA | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| ACTR2 | miR-181a-5p | miR-151-3p | miR-199a-3p | miR-199b-3p | miR-15b-5p | miR-195-5p | |||||
| AKIRIN2 | miR-181a-5p | miR-27b-3p | miR-139-5p | ||||||||
| APLP2 | miR-181a-5p | miR-139-5p | miR-199a-3p | miR-199b-3p | |||||||
| ARF3 | miR-181a-5p | miR-27b-3p | |||||||||
| BCL2L11 | miR-181a-5p | miR-199a-3p | miR-199b-3p | miR-30e-5p | miR-30c-5p | miR-30d-5p | miR-181d-5p | miR-92b-3p | miR-30a-5p | miR-148b-3p | |
| BTG2 | miR-181a-5p | miR-27b-3p | miR-199a-5p | let-7d-5p | miR-15b-5p | miR-25-3p | let-7f-5p | miR-92b-3p | miR-195-5p | let-7e-5p | miR-146a-5p |
| CALM1 | miR-181a-5p | miR-139-5p | miR-143-3p | miR-151-3p | miR-199a-3p | miR-199b-3p | let-7d-5p | miR-181d-5p | let-7f-5p | miR-195-5p | let-7e-5p |
| CD4 | miR-181a-5p | ||||||||||
| CXCL2 | miR-181a-5p | ||||||||||
| DAZAP2 | miR-181a-5p | miR-27b-3p | miR-139-5p | miR-151-3p | miR-29b-1-5p | miR-146a-5p | |||||
| DDX3X | miR-181a-5p | miR-27b-3p | miR-139-5p | miR-199a-5p | miR-671-3p | miR-195-5p | miR-146a-5p | ||||
| DNAJB1 | miR-181a-5p | miR-27b-3p | miR-143-3p | miR-486-5p | |||||||
| EGR1 | miR-181a-5p | miR-143-3p | miR-199a-3p | miR-199b-3p | miR-146a-5p | ||||||
| ERAP1 | miR-181a-5p | ||||||||||
| EREG | miR-181a-5p | miR-199a-3p | miR-199b-3p | miR-192-5p | |||||||
| F5 | miR-181a-5p | ||||||||||
| HIPK1 | miR-181a-5p | miR-139-5p | miR-143-3p | miR-199a-3p | miR-199a-5p | miR-199b-3p | miR-486-5p | miR-146a-5p | |||
| HSP90B1 | miR-181a-5p | miR-152-3p | miR-181d-5p | miR-223-3p | miR-148b-3p | ||||||
| IL1A | miR-181a-5p | miR-181d-5p | miR-505-3p | ||||||||
| IL6ST | miR-181a-5p | miR-27b-3p | miR-143-3p | miR-152-3p | miR-223-3p | miR-505-3p | miR-148b-3p | ||||
| INPP4A | miR-181a-5p | miR-223-3p | |||||||||
| KMT2A | miR-181a-5p | miR-27b-3p | miR-199a-3p | miR-199b-3p | miR-148b-3p | miR-195-5p | miR-146a-5p | ||||
| LMAN1 | miR-181a-5p | miR-152-3p | miR-148b-3p | ||||||||
| MARCKS | miR-181a-5p | miR-27b-3p | miR-143-3p | miR-199a-5p | miR-584-5p | miR-200c-3p | miR-128-3p | ||||
| MCL1 | miR-181a-5p | miR-139-5p | miR-151-3p | miR-199a-3p | miR-199b-3p | miR-486-5p | miR-584-5p | miR-628-3p | |||
| NKTR | miR-181a-5p | miR-27b-3p | miR-151-3p | ||||||||
| NR4A2 | miR-181a-5p | miR-361-5p | miR-30e-5p | miR-30c-5p | miR-30d-5p | miR-30a-5p | |||||
| NR4A3 | miR-181a-5p | miR-25-3p | miR-92b-3p | ||||||||
| PRRC2C | miR-181a-5p | miR-27b-3p | miR-486-5p | miR-195-5p | |||||||
| SOCS3 | miR-181a-5p | miR-30e-5p | miR-30c-5p | miR-30d-5p | miR-152-3p | miR-30a-5p | miR-148b-3p | ||||
| TNF | miR-181a-5p | miR-181d-5p | |||||||||
| YY1 | miR-181a-5p | let-7f-5p | let-7e-5p | ||||||||
| ZFP36L2 | miR-181a-5p | miR-27b-3p | miR-128-3p | ||||||||
| TNFAIP3 | miR-27b-3p | let-7e-5p | |||||||||
| PLK2 | miR-27b-3p | miR-126-3p | miR-128-3p | miR-146a-5p | |||||||
| MAP4K5 | miR-27b-3p | miR-128-3p | |||||||||
| HSPD1 | miR-27b-3p | miR-143-3p | miR-628-3p | miR-505-3p | |||||||
| IKZF1 | miR-27b-3p | miR-199a-5p | |||||||||
| IL10 | miR-27b-3p | let-7d-5p | let-7f-5p | let-7e-5p | miR-146a-5p | ||||||
| CD28 | miR-27b-3p | miR-143-3p | miR-15b-5p | miR-195-5p | |||||||
| MLL | miR-27b-3p | miR-143-3p | miR-199a-3p | miR-199b-3p | |||||||
| PIK3R1 | miR-27b-3p | miR-126-3p | miR-199a-3p | miR-199b-3p | miR-486-5p | miR-15b-5p | miR-128-3p | miR-195-5p | |||
| PTGER4 | miR-27b-3p | miR-25-3p | miR-92b-3p | miR-146a-5p | |||||||
| STAT1 | miR-27b-3p | miR-584-5p | miR-128-3p | miR-146a-5p | |||||||
| ICOS | miR-27b-3p | let-7d-5p | let-7f-5p | let-7e-5p | |||||||
| KAT6A | miR-27b-3p | miR-139-5p | miR-143-3p | ||||||||
| VEGFA | miR-126-3p | miR-139-5p | miR-199a-3p | miR-199a-5p | miR-199b-3p | miR-486-5p | miR-361-5p | miR-15b-5p | miR-195-5p | ||
| CXCR4 | miR-139-5p | miR-143-3p | |||||||||
| JUN | miR-139-5p | miR-200c-3p | |||||||||
| AP2M1 | miR-139-5p | miR-143-3p | miR-423-5p | ||||||||
| TCF3 | miR-139-5p | miR-195-5p | |||||||||
| CREM | miR-139-5p | miR-199a-5p | |||||||||
| RBL2 | miR-139-5p | miR-199a-3p | miR-628-3p | ||||||||
| TGIF1 | miR-139-5p | miR-27b-3p | miR-199a-3p | miR-199b-3p | miR-25-3p | miR-92b-3p | miR-146a-5p | ||||
| THBD | miR-139-5p | ||||||||||
| THBS1 | miR-139-5p | miR-143-3p | miR-151-3p | miR-199a-3p | miR-199b-3p | miR-628-3p | let-7d-5p | miR-194-5p | let-7f-5p | let-7e-5p | |
| MMP8 | miR-139-5p | ||||||||||
| DDX6 | miR-139-5p | miR-143-3p | miR-199a-5p | miR-152-3p | miR-148b-3p | ||||||
| PGK1 | miR-27b-3p | miR-143-3p | miR-146a-5p | ||||||||
| TSC22D3 | miR-143-3p | miR-195-5p | |||||||||
| IL6R | miR-143-3p | let-7e-5p | |||||||||
| DUSP1 | miR-143-3p | miR-199a-3p | let-7d-5p | miR-200c-3p | miR-152-3p | miR-25-3p | let-7f-5p | miR-148b-3p | let-7e-5p | ||
| CD84 | miR-143-3p | ||||||||||
| CTLA4 | miR-143-3p | ||||||||||
| STAT2 | miR-143-3p | ||||||||||
| TLR2 | miR-143-3p | miR-146a-5p | |||||||||
| PPP2R1A | miR-143-3p | miR-199a-5p | miR-15b-5p | miR-195-5p | |||||||
| SIKE1 | miR-143-3p | miR-199b-3p | miR-199a-3p | miR-146a-5p | |||||||
| DUSP2 | miR-143-3p | ||||||||||
| FLOT1 | miR-143-3p | ||||||||||
| FOSL2 | miR-143-3p | miR-30e-5p | miR-30c-5p | miR-30d-5p | miR-25-3p | miR-92b-3p | miR-30a-5p | miR-195-5p | |||
| IKZF3 | miR-151-3p | miR-146a-5p | |||||||||
| PTPN12 | miR-151-3p | miR-486-5p | miR-194-5p | ||||||||
| NAMPT | miR-199a-3p | miR-199b-3p | |||||||||
| PDE4B | miR-199a-3p | miR-199b-3p | miR-152-3p | miR-148b-3p | |||||||
| STK4 | miR-199a-5p | miR-486-5p | |||||||||
| IKBKB | miR-199a-5p | miR-200c-3p | miR-15b-5p | miR-195-5p | |||||||
| HSPA4 | miR-199a-5p | ||||||||||
| GNAI2 | miR-29b-1-5p | miR-30e-5p | miR-30c-5p | miR-30d-5p | miR-30a-5p | ||||||
| ZNF331 | miR-486-5p | miR-146a-5p | |||||||||
| PTX3 | miR-628-3p | ||||||||||
| CCL3 | let-7d-5p | let-7f-5p | let-7e-5p | ||||||||
| OLR1 | let-7d-5p | let-7e-5p | |||||||||
| S100A8 | let-7d-5p | let-7f-5p | let-7e-5p | ||||||||
| SOCS1 | let-7d-5p | miR-30e-5p | miR-30c-5p | miR-30d-5p | let-7f-5p | miR-30a-5p | let-7e-5p | ||||
| DGKA | miR-200c-3p | ||||||||||
| NAPA | miR-330-3p | ||||||||||
| ARHGDIA | miR-15b-5p | miR-195-5p | |||||||||
| SNX27 | miR-152-3p | miR-148b-3p | |||||||||
| NLRP3 | miR-223-3p | ||||||||||
| RHOB | miR-223-3p | ||||||||||
| FLOT2 | miR-148b-3p | miR-146a-5p | |||||||||
| RAB35 | miR-148b-3p | miR-195-5p | |||||||||
| REL | let-7e-5p | miR-146a-5p | |||||||||
| KIR2DL4 | miR-146a-5p | ||||||||||