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. 2018 May 23;8:8058. doi: 10.1038/s41598-018-26331-6

Table 1.

Statistical comparison of nuclear genomes of R. subcapitata, M. neglectum, T. obliquus, C. zofingiensis and C. reinhardtii.

Raphidocelis subcapitata Monoraphidium neglectum Tetradesmus obliquus Chromochloris zofingiensis ** Chlamydomonas reinhardtii ***
Strain NIES-35 SAG 48.87 UTEX393 SAG 211-14 CC503
Reference This study Bogen et al. (2013) Carreres et al. (2017), this study Roth et al. (2017) Merchant et al. (2008)
Assembly size (Mbp) 51 (≥5 kb) 68 108 58 111
Number of scaffolds 417 (≥1 kb),
300 (≥5 kb)
857 (>20 kb) 1,368 19 (chromosomes) 54
L50 (Scaffolds) 46 1,303 177 7
N50 (Scaffolds, kbp) 342 16 187 chromosomes 7,800
GC% 72 65 57 51 64
Number of CDSs 13,383 16,761 12,496 15,274 17,741
Mean protein length (aa) 561 348 452 427 736
Mean intron length (bp) 230 302 462 284 270
Number of introns per gene 5.7 4.0 7.8 4.0 7.5
coding%* 44.0 25.7 15.7 39**** 35.2

*Only protein-coding genes.

**JGI v. 5.2.3.2.

***JGI v. 5.5.

****Roth et al. (2017).