Skip to main content
. 2018 May 9;2018:1391265. doi: 10.1155/2018/1391265

Table 1.

Results of 10-fold cross validation of SVM model on 1,072 PPIs between 36 RNA viruses and 812 human proteins with different ratios of positive to negative instances.

P : N Dataset Sn (%) Sp (%) Acc (%) PPV (%) NPV (%) MCC AUC
1 : 1 1 88.24 97.34 92.79 97.07 89.22 0.859 0.963
2 81.03 94.36 87.7 93.49 83.26 0.761 0.931
3 77.74 94.04 85.89 92.88 80.86 0.728 0.926
mean ± SD 82.34 ± 4.39 95.25 ± 1.49 88.79 ± 2.92 94.48 ± 1.85 84.45 ± 3.51 0.78 ± 0.06 0.94 ± 0.02

1 : 2 1 64.89 97.34 86.52 92.41 84.72 0.693 0.893
2 58.31 97.57 84.48 92.31 82.4 0.646 0.886
3 63.64 96.08 85.27 89.04 84.09 0.661 0.891
mean ± SD 62.28 ± 2.85 97 ± 0.65 85.42 ± 0.84 91.25 ± 1.57 83.74 ± 0.98 0.67 ± 0.02 0.89 ± 0.00

1 : 3 1 46.24 98.28 85.27 89.94 84.58 0.58 0.850
2 46.87 98.59 85.66 91.72 84.77 0.59 0.863
3 49.37 97.28 85.31 85.83 85.22 0.576 0.858
mean ± SD 47.49 ± 1.35 98.05 ± 0.56 85.41 ± 0.18 89.16 ± 2.47 84.86 ± 0.27 0.58 ± 0.01 0.86 ± 0.01

Sn: sensitivity, Sp: specificity, Acc: accuracy, PPV: positive predictive value, NPV: negative predictive value, MCC: Matthews correlation coefficient, and AUC: the area under the ROC curve.