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Results of testing our SVM and DeNovo's SVM [9] on DeNovo's dataset of 425 positive and 425 negative PPIs.
| Method | Sn (%) | Sp (%) | ACC (%) | PPV (%) | NPV (%) | MCC | AUC |
|---|---|---|---|---|---|---|---|
| Our SVM | 86.35 | 86.59 | 86.47 | 86.56 | 86.39 | 0.729 | 0.926 |
| DeNovo's SVM | 80.71 | 83.06 | 81.90 | — | — | — | — |
Sn: sensitivity, Sp: specificity, Acc: accuracy, PPV: positive predictive value, NPV: negative predictive value, MCC: Matthews correlation coefficient, AUC: the area under the ROC curve, and “—”: not available.
