Fig. 6.

Maize yellow dwarf virus (MYDV-RMV) genome organization and alignment of de novo-assembled non-overlapping contigs from symptomatic (S) and asymptomatic (A) maize, cultivated (*) or wild (**) sorghum. Labels are as in Fig. 2. a MYDV-RMV genome organization and gene expression. Open reading frames are represented by cylinders. Genomic RNA is represented by a solid line. Coordinates are based on reference sequence number MF974579.2. Every sample categorized as infected contributed one representative contig. Shorter, redundant contigs were not illustrated. b Genome coverage after reference based assembly using Bowtie v2 for one representative sample