Table 1. Experimentally determined and predicted binding affinity ranges of the 23 opioids docked at the μOR.
The 8 fentanyl derivatives and 7 fentanyl congeners are listed first and ordered by increasing binding affinity, and the 8 morphine derivatives are listed last. The green labels indicate that the model correctly predicted the binding concentration regime, yellow indicates that the model predicted the compound to bind stronger than the measured Ki, and red indicates that the model predicted the compound to bind less strongly than the measured Ki.
Drug | Human Ki (nM) [35] | Marmoset Ki (nM) [38] | Guinea Pig Ki (nM) [13] | Average Docking Score (ADS) | Standard Deviation in Score | Predicted Conc. Regime |
---|---|---|---|---|---|---|
N-methyl fentanyl* | 18000 ± 3000 | -7.89 | 0.21 | > 100 nM | ||
(1R,2R)Tramadol | 12,500 | -7.85 | 0.06 | > 100 nM | ||
(1S,2S) Tramadol | 12,500 | -7.97 | 0.20 | > 100 nM | ||
Meperidine | 450 | -7.77 | 0.07 | > 100 nM | ||
Propoxyphene | 120 | -9.56 | 0.08 | 0–100 nM | ||
N-Methyl carfentanil* | 42 ± 6 | -8.53 | 0.07 | 0–100 nM | ||
Diphenoxylate | 12.4 | -10.1 | 0.47 | Sub nM | ||
Alfentanil | 7.39 | 14.4 ± 4.2 | -10.5 | 0.56 | Sub nM | |
R-Methadone | 3.38 | -8.69 | 0.12 | 0–100 nM | ||
S-Methadone | 3.38 | -8.63 | 0.07 | 0–100 nM | ||
Fentanyl | 1.35 | 1.32 ± 0.35 | 1.2 ± 0.2 | -9.43 | 0.38 | 0–100 nM |
Sufentanil | 0.138 | 0.24 ± 0.05 | -9.89 | 0.23 | Sub nM | |
Carfentanil^ | 0.22 ± 0.08 | 0.024 ± 0.004 | -10.8 | 0.30 | Sub nM | |
Lofentanil^ | 0.055 ± 0.006 | 0.023 ± 0.004 | -10.8 | 0.50 | Sub nM | |
R30490* | 0.09 ± 0.01 | -10.3 | 0.31 | Sub nM | ||
Codeine | 734 | -8.23 | 0.16 | > 100 nM | ||
(+)-Pentazocine | 118 | -7.77 | 0.12 | > 100 nM | ||
Oxycodone | 25.9 | -8.78 | 0.27 | 0–100 nM | ||
Nalbuphine | 2.12 | -8.47 | 0.29 | 0–100 nM | ||
Morphine | 1.14 | -7.76 | 0.14 | > 100 nM | ||
Oxymorphone | 0.406 | -8.40 | 0.18 | 0–100 nM | ||
Hydromorphone | 0.365 | -7.94 | 0.26 | > 100 nM | ||
Buprenorphine | 0.216 | -9.76 | 0.48 | 0–100 nM |
*Experimental data from guinea pig whole brain membranes.
^Experimental data from marmoset brain homogenates.