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. 2018 May 17;9:812. doi: 10.3389/fmicb.2018.00812

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Copyright © 2018 Pérez-de-Mora, Lacourt, McMaster, Liang, Dworatzek and Edwards.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Phylogenetic tree of Dehalococcoides mccartyi reductive dehalogenases based on amino acid sequences. Tree includes sequences predicted from 248 rdhA genes found in eleven isolated D. mccartyi strains as well as those found in the mixed dechlorinating culture KB-1, including the rdhA gene sequence found in Geobacter KB-1 as an outgroup. The scale is the number of substitutions per amino acid. Bootstraps are shown at tree nodes. Sequences names are colored corresponding to their source as shown in the legend at bottom left. The numbers and different branch colors highlight ortholog groups (OGs) where sequences have >90% PID. Sequences corresponding to characterized RDases are circled and their substrates shown in the top right legend (chlorinated substrate abbreviations as in text, plus TeCB, tetrachlorobenzene; TCB, trichlorobenzene).