Table 1.
Type II toxin/antitoxin systems in Aggregatibacter actinomycetemcomitans
| Toxin | Antitoxin | Gene identity | Family | Total score | Query cover | E value | Maximum identity |
|---|---|---|---|---|---|---|---|
| mazF | mazE | D11S_0905‐0906 | mazEF | 101 | 92% | 2e‐28 | 33% |
| chpBK | chpBI | D11S_0919‐0920 | mazEF | 88.6 | 93% | 2e‐23 | 42% |
| hipA | hipB | D11S_1069‐1070 | hipAB | 108 | 21% | 1e‐28 | 45% |
| yafQ | dinJ | D11S_1194‐1195 | relBE | 89.7 | 95% | 2e‐24 | 36% |
| yoeB | yafM | D11S‐1718‐1719 | relBE | 125 | 100% | 1e‐38 | 63% |
| relE | relB | D11S_1798‐1799 | relBE | 112 | 94% | 6e‐33 | 57% |
| relE | relB | D11S_2133‐2134 | relBEa | 44.7 | 88% | 2e‐7 | 12% |
| relE | relB | D11S_1417‐1418 | relBE | 102 | 98% | 3e‐30 | 54% |
| relE | relB | D11S_1144‐1145 | relBE | 149 | 97% | 2e‐46 | 59% |
| — | — | D11S_1023‐1024 | — | — | — | — | — |
| — | — | D11S_0150‐0151 | a | — | — | — | — |
| — | — | D11S_0499‐0500 | a | — | — | — | — |
| — | — | D11S_0469‐0470 | b | — | — | — | — |
| — | — | D11S_2094‐2095 | b | — | — | — | — |
a
Sequence analysis indicated that this operon contained a toxin and/or antitoxin pseudogene.
b
Identified by TAfinder but present in a three‐gene operon with a non‐toxin/antitoxin (TA) ‐related gene (see text).