Skip to main content
. 2018 May 25;13(5):e0195799. doi: 10.1371/journal.pone.0195799

Table 2. Number of positive NVT, PCV7, the extra 6 serotypes in PCV13 and All (including non-typeable) carriage isolates in 2012/13 and the overall carriage rate for 2001/02, 2008/09, 2012/13 and 2015/16.

The proportion for 2001/02 was calculated accounting for multiple testing of the participants.

NVT (95% CI)1 PCV7 (95% CI) Extra 6 PCV13 serotypes (95% CI) ALL (95% CI)
<5 years Participants 15/16 (n = 293) 150 0 3 152
Proportion 15/16 51.1% (45.3–57.0) 0.0% (0.0–1.3) 1.0% (0.2–3.0) 51.9% (46.0–57.7)
Proportion 12/13 46.9% (41.1–53.5) 0.4% (0.0–2.0) 0.4% (0.0–2.0) 47.7% (41.8–53.5)
Proportion 08/09 37.0% (30.5–44.0) 4.2% (2.1–8.0) 9.9%(6.4–14.9) 51.0% (44.0–58.0)
Proportion 01/02 8.5% (6.4–11.1) 31.9% (28.1–36.1) 8.0% (6.0–10.6) 48.4% (44.1–52.7)
5–20 years Participants 15/16 (n = 73) 18 0 2 20
Proportion 15/16 24.7% (15.3–36.1) 0.0% (0.0–4.9) 2.7% (0.3–9.5) 27.4% (17.6–39.1)
Proportion 12/13 19.6% (13.3–28.0) 0.9% (0.0–4.9) 1.8% (0.5–6.3) 22.3% (15.6–30.9)
Proportion 08/09 22.8% (13.8–35.2) 0.0% (0.0–6.3) 5.3% (1.8–14.4) 28.1% (18.1–40.8)
Proportion 01/02 8.5% (5.6–12.8) 10.0% (7.5–13.4) 2.0% (1.0–4.1) 21.1% (16.5–26.5)
>20 years Participants 15/16 (n = 284) 8 0 0 8
Proportion 15/16 2.8% (1.2–5.4) 0.0% (0.0–1.3) 0.0% (0.0–1.3) 2.8% (1.2–5.5)
Proportion 12/13 3.1% (1.6–5.7) 0.0% (0.0–1.3) 0.3% (0.0–1.9) 3.4% (1.9–6.1)
Proportion 08/09 6.0% (3.1–11.4) 2.3% (0.8–6.4) 1.5% (0.4–5.3) 9.8% (5.8–16)
Proportion 01/02 1.9% (1.3–2.9) 4.0% (3.0–5.4) 1.6% (1.0–2.5) 7.6% (6.1–9.4)
All Participants 15/16 (n = 650) 176 0 5 180
Proportion 15/16 27.0% (23.7–30.7) 0.0% (0.0–0.6) 0.7% (0.3–1.8) 27.7% (24.3–31.3)
Proportion 12/13 23.6% (20.5–26.9) 0.3% (0.1–1.1) 0.6% (0.2–1.5) 24.5% (21.4–27.8)
Proportion 08/09 24.1% (20.1–28.6) 2.9% (1.6–5.1) 6.3% (4.3–9.2) 33.2% (28.7–38.1)
Proportion 01/02 5.2% (4.2–6.5) 15.2% (13.2–17.4) 4.1% (3.2–5.2) 24.4% (21.9–27.1)

1 6C and non-typeable pneumococci are included in the non-vaccine types. Multiple carriage was detected in 5 individuals. These had 10A/21, 22F/Non-typeable, 23B/Non-typeable, 3/23B and 9N/6C. When assessing the proportion of individuals who carried any VT or NVT serotype, multiple carriage episodes in individuals who carried both a VT and NVT serotype are included. For this reason adding up the number of VT and NVT carriers is one more than the total for carrying any serotype. Non-typeable isolates were counted as NVTs for this analysis to be consistent with the 2012/13 analysis.